RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-206ENST00000474564 MRE11P49959 708 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 NLRP12P59046 1061 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 BEX3Q00994 111 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 RAD51AP2Q09MP3 1159 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 ALCAMQ13740 583 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 TFDP1Q14186 410 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 MXD4Q14582 209 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-206ENST00000474564 KIAA0753Q2KHM9 967 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 TMEM63BQ5T3F8 832 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 NT5DC1Q5TFE4 455 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 ZNF658Q5TYW1 1059 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-206ENST00000474564 IER5Q5VY09 327 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 PLA2G4FQ68DD2 849 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.57
COL12A1-206ENST00000474564 C1orf186Q6ZWK4 172 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 KCNK18Q7Z418 384 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 GRAMD1CQ8IYS0 662 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 METTL13Q8N6R0 699 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 PCYT2Q99447 389 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 C16orf70Q9BSU1 422 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 WRAP73Q9P2S5 460 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-206ENST00000474564 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.58
COL12A1-206ENST00000474564 BECN2A8MW95 431 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 BIN1O00499 593 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 ZBTB39O15060 712 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 MAFO75444 373 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 F2P00734 622 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 INSRRP14616 1297 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 NPEPPSP55786 919 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 IGBP1P78318 339 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 PURAQ00577 322 aaKnown RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 CAP1Q01518 475 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 TYRO3Q06418 890 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 DMP1Q13316 513 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 GIT2Q14161 759 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 EMC2Q15006 297 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 GRIK4Q16099 956 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 KCNA10Q16322 511 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 TPD52L1Q16890 204 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 FAM47CQ5HY64 1035 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 ODR4Q5SWX8 454 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 RSPH3Q86UC2 560 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 TRIM50Q86XT4 487 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 FAM178BQ8IXR5 827 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 PSPC1Q8WXF1 523 aaKnown RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 REEP2Q9BRK0 252 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 RNPEPQ9H4A4 650 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 MRPL44Q9H9J2 332 aaKnown RBP11.45□□□□□ -0.58
COL12A1-206ENST00000474564 SUGCTQ9HAC7 445 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 NOD1Q9Y239 953 aa11.45□□□□□ -0.58
COL12A1-206ENST00000474564 BICDL2A1A5D9 508 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 CCDC169A6NNP5 214 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 SMTNL1A8MU46 457 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 GOLGA6L19H0YKK7 550 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 PSMA7O14818 248 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 ADCY6O43306 1168 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 HIP1RO75146 1068 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 ADAMTS4O75173 837 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 ASGR1P07306 291 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 PRR29P0C7W0 189 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 PLS3P13797 630 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 KLRC1P26715 233 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 SARSP49591 514 aaKnown RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 RTP1P59025 263 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 PTPN11Q06124 597 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 LRRC41Q15345 812 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 FAM26FQ5R3K3 315 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 EFCAB12Q6NXP0 572 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 CXCL17Q6UXB2 119 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 KLHDC9Q8NEP7 349 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 LENG1Q96BZ8 264 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 DEFB118Q96PH6 123 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 TSG101Q99816 390 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 DHX33Q9H6R0 707 aaKnown RBP11.44□□□□□ -0.58
COL12A1-206ENST00000474564 EXOC7Q9UPT5 735 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 MCM3APO60318 1980 aa11.44□□□□□ -0.58
COL12A1-206ENST00000474564 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 M0QZ92 97 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 DNM1LO00429 736 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 STBD1O95210 358 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 FGFR1OPO95684 399 aaKnown RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms