RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 FLT1P17948 1338 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 A0A1B0GUL6 1792 aa8.71□□□□□ -1.01
CCDC93-208ENST00000474546 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 KCNK3O14649 394 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 PPIP5K2O43314 1243 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 RAD51CO43502 376 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 CALUO43852 315 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 ATP6V1G2O95670 118 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 LMNAP02545 664 aaKnown RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 ALADP13716 330 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 PLCG2P16885 1265 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 CASP1P29466 404 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 CHRNA3P32297 505 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 HPDP32754 393 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 SLC1A4P43007 532 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 PMS1P54277 932 aaKnown RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 HADHBP55084 474 aaKnown RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 SLC7A5Q01650 507 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 CAV1Q03135 178 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 STK4Q13043 487 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 NR1H3Q13133 447 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 IL17AQ16552 155 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 HYIQ5T013 277 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 MFSD5Q6N075 450 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 LRRC55Q6ZSA7 311 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 SYDE1Q6ZW31 735 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 STXBP4Q6ZWJ1 553 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 TRIM59Q8IWR1 403 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 RHOT2Q8IXI1 618 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 ERMNQ8TAM6 284 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 FBF1Q8TES7 1133 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 HDAC7Q8WUI4 952 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 UBLCP1Q8WVY7 318 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 RAD54LQ92698 747 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 STAMQ92783 540 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 MTMR8Q96EF0 704 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 SCLT1Q96NL6 688 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-208ENST00000474546 USP40Q9NVE5 1235 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 AMFRQ9UKV5 643 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 NFS1Q9Y697 457 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 DUSP10Q9Y6W6 482 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF541Q9H0D2 1346 aa8.71□□□□□ -1.02
CCDC93-208ENST00000474546 SCN7AQ01118 1682 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 ANKRD65E5RJM6 399 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 F8VZ95 297 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 GPR25O00155 361 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 STXBP3O00186 592 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 RGS16O15492 202 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 PRKAB2O43741 272 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CEP104O60308 925 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CCNT1O60563 726 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CTNND1O60716 968 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 PRDM1O75626 825 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TFRCP02786 760 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 MMP13P45452 471 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 GUCY2FP51841 1108 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 NAPAP54920 295 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 PTENP60484 403 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 SARNPP82979 210 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 GFPT1Q06210 699 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 EHHADHQ08426 723 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TCEAL1Q15170 157 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 RBBP5Q15291 538 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CALCRLQ16602 461 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 FAM26FQ5R3K3 315 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CLEC4GQ6UXB4 293 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TRMT10CQ7L0Y3 403 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CYFIP1Q7L576 1253 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TRPM8Q7Z2W7 1104 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 KRT26Q7Z3Y9 468 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 PIGWQ7Z7B1 504 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 SH2D3CQ8N5H7 860 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 RAPGEF5Q92565 580 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TBC1D5Q92609 795 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 ARMC5Q96C12 935 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 FOXP3Q9BZS1 431 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 NOD2Q9HC29 1040 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 TXLNGQ9NUQ3 528 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 INTS9Q9NV88 658 aaKnown RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 MTUS1Q9ULD2 1270 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CORO1CQ9ULV4 474 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-208ENST00000474546 C15orf41Q9Y2V0 281 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 UBE4BO95155 1302 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 ITGB4P16144 1822 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
CCDC93-208ENST00000474546 MUC6Q6W4X9 2439 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 USP17L21D6R901 530 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 POLRMTO00411 1230 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 MMEP08473 750 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms