RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 CEP112Q8N8E3 955 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 HNRNPLLQ8WVV9 542 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 TRIB2Q92519 343 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 PYM1Q9BRP8 204 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 TUFT1Q9NNX1 390 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 P4HBP07237 508 aaKnown RBP22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 SMPD1P17405 629 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 JAK3P52333 1124 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 DPYDQ12882 1025 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 SMC1AQ14683 1233 aaKnown RBP22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 LENG1Q96BZ8 264 aaPredicted RBP22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 PARD6BQ9BYG5 372 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 GABBR1Q9UBS5 961 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 TCEAL9Q9UHQ7 104 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 MYH11P35749 1972 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 DNAH12Q6ZR08 3092 aa22.93■■□□□ 1.26
SMIM11A-204ENST00000474455 MYMKA6NI61 221 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 SEC31AO94979 1220 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 SSBP05455 408 aaKnown RBP eCLIP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 ZNF865P0CJ78 1059 aaPredicted RBP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 OLFML2BQ68BL8 750 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 KCNV1Q6PIU1 500 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 METTL7BQ6UX53 244 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 SRGAP1Q7Z6B7 1085 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 DHX37Q8IY37 1157 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 TSPYL1Q9H0U9 437 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 PSD3Q9NYI0 1048 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 STK17AQ9UEE5 414 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 LOXHD1Q8IVV2 1947 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 NPHP3-ACAD11A0A0J9YXS1 232 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 KIF5CO60282 957 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 ATG7O95352 703 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 PLA2G4BP0C869 781 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 OAS2P29728 719 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 SFNP31947 248 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 QARSP47897 775 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 FILIP1LQ4L180 1135 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 SV2BQ7L1I2 683 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 DNAJC5GQ8N7S2 189 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 PCYT2Q99447 389 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 POLD4Q9HCU8 107 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 DNM3Q9UQ16 869 aa22.92■■□□□ 1.26
SMIM11A-204ENST00000474455 ZNF862O60290 1169 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 SASH3O75995 380 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 FECHP22830 423 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 PBX1P40424 430 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 SLC12A3P55017 1021 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 IRX5P78411 483 aaPredicted RBP22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 ARHGAP1Q07960 439 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 DYMQ7RTS9 669 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 TRPV1Q8NER1 839 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 FUT8Q9BYC5 575 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 BHMT2Q9H2M3 363 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 CUEDC2Q9H467 287 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 ADGRG1Q9Y653 693 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 STK24Q9Y6E0 443 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 ITIH6Q6UXX5 1313 aa22.91■■□□□ 1.26
SMIM11A-204ENST00000474455 TUBBP07437 444 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 SUPT20HL2P0C7V6 817 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 XRCC5P13010 732 aaKnown RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 ELNP15502 786 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 RAD51AP2Q09MP3 1159 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 GIMAP8Q8ND71 665 aaPredicted RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 SPATA33Q96N06 139 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 GPR20Q99678 358 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 SAMSN1Q9NSI8 373 aaKnown RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 SAGE1Q9NXZ1 904 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 SRRDQ9UH36 339 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 ARID2Q68CP9 1835 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 TULP2O00295 520 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 GTPBP6O43824 516 aaPredicted RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 FKTNO75072 461 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 PSAPP07602 524 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 ATP4AP20648 1035 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 TCF7P36402 384 aaPredicted RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 ARSHQ5FYA8 562 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 CDKAL1Q5VV42 579 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 APTXQ7Z2E3 356 aaKnown RBP22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 MED15Q96RN5 788 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 TRIM9Q9C026 710 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 ZSWIM4Q9H7M6 989 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 CDC23Q9UJX2 597 aa22.9■■□□□ 1.26
SMIM11A-204ENST00000474455 POLR3GO15318 223 aaPredicted RBP22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 SLC26A4O43511 780 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 CHMP4BP1P59074 171 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 PSMC5P62195 406 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 MAP2K1Q02750 393 aaPredicted RBP22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 MIS18BP1Q6P0N0 1132 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 CNGA4Q8IV77 575 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 TRMT44Q8IYL2 757 aaKnown RBP22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 GSDMAQ96QA5 445 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 MRPL44Q9H9J2 332 aaKnown RBP22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 SYNRGQ9UMZ2 1314 aa22.89■■□□□ 1.25
SMIM11A-204ENST00000474455 BACH1O14867 736 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 KLRC4O43908 158 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 STBD1O95210 358 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 EYA4O95677 639 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 DUSP28Q4G0W2 176 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 TRIM50Q86XT4 487 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms