RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZHX3Q9H4I2 956 aa22.57■■□□□ 1.2
CDHR3-210ENST00000474330 DNAH12Q6ZR08 3092 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 PSMA7O14818 248 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 PRKAR2AP13861 404 aaKnown RBP22.56■■□□□ 1.2
CDHR3-210ENST00000474330 TPM4P67936 248 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 PRAMEF19Q5SWL8 479 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 PLPPR4Q7Z2D5 763 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 TRMT1LQ7Z2T5 733 aaKnown RBP22.56■■□□□ 1.2
CDHR3-210ENST00000474330 UBE2Q1Q7Z7E8 422 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 GUF1Q8N442 669 aaKnown RBP22.56■■□□□ 1.2
CDHR3-210ENST00000474330 PPTC7Q8NI37 304 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 CEP170P1Q96L14 293 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 HMX1Q9NP08 348 aaPredicted RBP22.56■■□□□ 1.2
CDHR3-210ENST00000474330 SEPT9Q9UHD8 586 aaPredicted RBP22.56■■□□□ 1.2
CDHR3-210ENST00000474330 NRBP1Q9UHY1 535 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 CTNND2Q9UQB3 1225 aa22.56■■□□□ 1.2
CDHR3-210ENST00000474330 FAM13AO94988 1023 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 TNFAIP2Q03169 654 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 MAPK7Q13164 816 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 NELFBQ8WX92 580 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 ANP32BQ92688 251 aaKnown RBP22.55■■□□□ 1.2
CDHR3-210ENST00000474330 SH2D3AQ9BRG2 576 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 NIFKQ9BYG3 293 aaKnown RBP22.55■■□□□ 1.2
CDHR3-210ENST00000474330 CYP26B1Q9NR63 512 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 OLFML3Q9NRN5 406 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 NRBP2Q9NSY0 501 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 SEL1LQ9UBV2 794 aa22.55■■□□□ 1.2
CDHR3-210ENST00000474330 SYNRGQ9UMZ2 1314 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 USO1O60763 962 aaKnown RBP22.54■■□□□ 1.2
CDHR3-210ENST00000474330 PTGS1P23219 599 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 SLC26A2P50443 739 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 SPATA1Q5VX52 437 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 SFR1Q86XK3 245 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 HSD3B7Q9H2F3 369 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 SMARCAD1Q9H4L7 1026 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 PARVGQ9HBI0 331 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 NFE2L3Q9Y4A8 694 aa22.54■■□□□ 1.2
CDHR3-210ENST00000474330 HIP1RO75146 1068 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 CCND3P30281 292 aaPredicted RBP22.53■■□□□ 1.2
CDHR3-210ENST00000474330 STX17P56962 302 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 DAW1Q8N136 415 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 GLG1Q92896 1179 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 FAM167AQ96KS9 214 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 POLD4Q9HCU8 107 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 GNEQ9Y223 722 aaKnown RBP22.53■■□□□ 1.2
CDHR3-210ENST00000474330 SFI1A8K8P3 1242 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 ADCY6O43306 1168 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 DGAT1O75907 488 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 CYBAP13498 195 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 CCNE1P24864 410 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 MYCT1Q8N699 235 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 AFG1LQ8WV93 481 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 BBXQ8WY36 941 aaPredicted RBP22.53■■□□□ 1.2
CDHR3-210ENST00000474330 PDLIM7Q9NR12 457 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 FANCLQ9NW38 375 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 TBC1D7Q9P0N9 293 aa22.53■■□□□ 1.2
CDHR3-210ENST00000474330 AP5Z1O43299 807 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 PPFIA4O75335 1185 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 KIF20AO95235 890 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 TFRCP02786 760 aaKnown RBP22.52■■□□□ 1.2
CDHR3-210ENST00000474330 CENPPQ6IPU0 288 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 SARM1Q6SZW1 724 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 MYOCDQ8IZQ8 938 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 GLIS3Q8NEA6 775 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 TRPV1Q8NER1 839 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 OR6J1Q8NGC5 347 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 P2RX5Q93086 422 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 DRC1Q96MC2 740 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 FGFBP2Q9BYJ0 223 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 PPME1Q9Y570 386 aa22.52■■□□□ 1.2
CDHR3-210ENST00000474330 BICDL2A1A5D9 508 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 HOXD8P13378 290 aaPredicted RBP22.51■■□□□ 1.19
CDHR3-210ENST00000474330 LRRC41Q15345 812 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 TARBP2Q15633 366 aaKnown RBP22.51■■□□□ 1.19
CDHR3-210ENST00000474330 MTERF2Q49AM1 385 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 LHX8Q68G74 356 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 CEP89Q96ST8 783 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 LARSQ9P2J5 1176 aaKnown RBP22.51■■□□□ 1.19
CDHR3-210ENST00000474330 FAM184BQ9ULE4 1060 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 FRMPD3Q5JV73 1810 aa22.51■■□□□ 1.19
CDHR3-210ENST00000474330 AKR1A1P14550 325 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 PMS1P54277 932 aaKnown RBP22.5■■□□□ 1.19
CDHR3-210ENST00000474330 PLCB2Q00722 1185 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 TTI2Q6NXR4 508 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 FOXR2Q6PJQ5 311 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 MAEAQ7L5Y9 396 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 EPM2AIP1Q7L775 607 aaPredicted RBP22.5■■□□□ 1.19
CDHR3-210ENST00000474330 TRIM50Q86XT4 487 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 MCPH1Q8NEM0 835 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 ATP8B4Q8TF62 1192 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 SCFD1Q8WVM8 642 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 FIZ1Q96SL8 496 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 MRPL44Q9H9J2 332 aaKnown RBP22.5■■□□□ 1.19
CDHR3-210ENST00000474330 Q9Y3F1 56 aa22.5■■□□□ 1.19
CDHR3-210ENST00000474330 LGALS2P05162 132 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 ZNF18P17022 549 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 MNX1P50219 401 aaPredicted RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 PLCB4Q15147 1175 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 ODR4Q5SWX8 454 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 SEMA6BQ9H3T3 888 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms