RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 GRM6O15303 877 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 XBP1P17861 261 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 TMOD1P28289 359 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 COL19A1Q14993 1142 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 TARBP2Q15633 366 aaKnown RBP17.8■□□□□ 0.44
CDPF1-205ENST00000474256 TCEAL5Q5H9L2 206 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 MIER3Q7Z3K6 550 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 ZNF710Q8N1W2 664 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 MAP7D2Q96T17 732 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 ADAM2Q99965 735 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 ADAMTS10Q9H324 1103 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 NSUN3Q9H649 340 aaKnown RBP17.8■□□□□ 0.44
CDPF1-205ENST00000474256 C1orf112Q9NSG2 853 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
CDPF1-205ENST00000474256 DDX25Q9UHL0 483 aaKnown RBP17.8■□□□□ 0.44
CDPF1-205ENST00000474256 DENND3A2RUS2 1198 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 C9IYK1 514 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 SLC37A4O43826 429 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 STBD1O95210 358 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
CDPF1-205ENST00000474256 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 LEXMQ3ZCV2 418 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 PPP4R3AQ6IN85 833 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 LRRC71Q8N4P6 559 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 P2RX5Q93086 422 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 CEP89Q96ST8 783 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 NIFKQ9BYG3 293 aaKnown RBP17.79■□□□□ 0.44
CDPF1-205ENST00000474256 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 LRFN2Q9ULH4 789 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 PLAGL2Q9UPG8 496 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 AKT3Q9Y243 479 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 PCDHB7Q9Y5E2 793 aa17.79■□□□□ 0.44
CDPF1-205ENST00000474256 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 DTNBO60941 627 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
CDPF1-205ENST00000474256 KCNA5P22460 613 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 GATMP50440 423 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 FAM189BP81408 668 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 CAMK1Q14012 370 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 DSC3Q14574 896 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 ME3Q16798 604 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 NAALADL2Q58DX5 795 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 XKR3Q5GH77 459 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 NEK8Q86SG6 692 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.78■□□□□ 0.44
CDPF1-205ENST00000474256 NEK9Q8TD19 979 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 OXER1Q8TDS5 423 aa17.78■□□□□ 0.44
CDPF1-205ENST00000474256 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
CDPF1-205ENST00000474256 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
CDPF1-205ENST00000474256 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 MMP1P03956 469 aa17.77■□□□□ 0.44
CDPF1-205ENST00000474256 GCFC2P16383 781 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 EIF4BP23588 611 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 GPC3P51654 580 aa17.77■□□□□ 0.44
CDPF1-205ENST00000474256 PAN2Q504Q3 1202 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 WASF1Q92558 559 aa17.77■□□□□ 0.44
CDPF1-205ENST00000474256 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
CDPF1-205ENST00000474256 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 FAM20AQ96MK3 541 aa17.77■□□□□ 0.44
CDPF1-205ENST00000474256 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 ALG13Q9NP73 1137 aaKnown RBP17.77■□□□□ 0.44
CDPF1-205ENST00000474256 RALGAPA2Q2PPJ7 1873 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 IGKV6-21A0A0C4DH24 114 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 EML1O00423 815 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 LARGE1O95461 756 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 ITGB1P05556 798 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 PPP2R5CQ13362 524 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 EARS2Q5JPH6 523 aaKnown RBP17.76■□□□□ 0.43
CDPF1-205ENST00000474256 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 NECAB1Q8N987 351 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 SPPL3Q8TCT6 385 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 SEPT9Q9UHD8 586 aaPredicted RBP17.76■□□□□ 0.43
CDPF1-205ENST00000474256 VAV3Q9UKW4 847 aa17.76■□□□□ 0.43
CDPF1-205ENST00000474256 BDP1A6H8Y1 2624 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 NCOR1O75376 2440 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 TMEM150BA6NC51 233 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 TBX3O15119 743 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 NCK2O43639 380 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
CDPF1-205ENST00000474256 SEC24BO95487 1268 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 DARSP14868 501 aaKnown RBP17.75■□□□□ 0.43
CDPF1-205ENST00000474256 IBSPP21815 317 aaPredicted RBP17.75■□□□□ 0.43
CDPF1-205ENST00000474256 PSMC5P62195 406 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 DRP2Q13474 957 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 ANO5Q75V66 913 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 KLHL23Q8NBE8 558 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 NSUN7Q8NE18 718 aaKnown RBP17.75■□□□□ 0.43
CDPF1-205ENST00000474256 HAS1Q92839 578 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
CDPF1-205ENST00000474256 BRWD1Q9NSI6 2320 aa17.75■□□□□ 0.43
CDPF1-205ENST00000474256 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
CDPF1-205ENST00000474256 DNAJB1P25685 340 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms