RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ID4P47928 161 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CDR1P51861 262 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 GABPB1Q06547 395 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TRIM14Q14142 442 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ASIC2Q16515 512 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 C15orf59Q2T9L4 293 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TUBB8Q3ZCM7 444 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 SLC45A4Q5BKX6 768 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 MFSD6Q6ZSS7 791 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TRIML2Q8N7C3 387 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TRIM58Q8NG06 486 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CCHCR1Q8TD31 782 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CSRNP1Q96S65 589 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 YIPF4Q9BSR8 244 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TRPV4Q9HBA0 871 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 GRID1Q9ULK0 1009 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 LY75O60449 1722 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 GAKO14976 1311 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 WDR17Q8IZU2 1322 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 A0A087X0B3 334 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PRR33A8MZF0 331 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ATP5J2-PTCD1G3V325 749 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 NDUFB5O43674 189 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 TLR5O60602 858 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ABLIM3O94929 683 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CYP11A1P05108 521 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PYGLP06737 847 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 THEGLP0DJG4 465 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PBLDP30039 288 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 STAT1P42224 750 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 POLD2P49005 469 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 HUNKP57058 714 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ZBTB16Q05516 673 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ITKQ08881 620 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 DGLUCYQ7Z3D6 616 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 VSIG1Q86XK7 387 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 NKX2-3Q8TAU0 364 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 FBXO30Q8TB52 745 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 MIPOL1Q8TD10 442 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CHFRQ96EP1 664 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 DDX11Q96FC9 970 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 FBXL18Q96ME1 805 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 RMDN3Q96TC7 470 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PI4K2AQ9BTU6 479 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 BRD9Q9H8M2 597 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 RSPH14Q9UHP6 348 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 COG5Q9UP83 839 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PRELID1Q9Y255 219 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 JRKLQ9Y4A0 524 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC7Q96M83 1385 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SOBPA7XYQ1 873 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 PMM2O15305 246 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SLC7A4O43246 635 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 PDE8AO60658 829 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 TSC22D2O75157 780 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 ADH1BP00325 375 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 DNTTP04053 509 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SLC12A2P55011 1212 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 MSS51Q4VC12 460 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 FCRLBQ6BAA4 426 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 POMZP3Q6PJE2 187 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 BNC2Q6ZN30 1099 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 PPP1R42Q7Z4L9 355 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 RNF180Q86T96 592 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 FAM114A1Q8IWE2 563 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC13Q8IYE1 715 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 AADATQ8N5Z0 425 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 IPMKQ8NFU5 416 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 OTUD7AQ8TE49 926 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SSH3Q8TE77 659 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 THAP3Q8WTV1 239 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 THOC1Q96FV9 657 aaKnown RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 JAKMIP1Q96N16 626 aaKnown RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SLC26A6Q9BXS9 759 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 ZWILCHQ9H900 591 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 IL21Q9HBE4 155 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 CD93Q9NPY3 652 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 INCENPQ9NQS7 918 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 ZDBF2Q9HCK1 2354 aa6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 SOS1Q07889 1333 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1-208ENST00000474246 CYP2D7A0A087X1C5 515 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 TRAF5O00463 557 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 STX6O43752 255 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 DXOO77932 396 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 POLR2BP30876 1174 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 NEDD9Q14511 834 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 PTPRNQ16849 979 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CAPRIN2Q6IMN6 1127 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RPAP2Q8IXW5 612 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 NIM1KQ8IY84 436 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 AFAP1L2Q8N4X5 818 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 UTP15Q8TED0 518 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms