RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 ERMNQ8TAM6 284 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 RAD9AQ99638 391 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 AGO3Q9H9G7 860 aaKnown RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CYP26B1Q9NR63 512 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 GBF1Q92538 1859 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 STBD1O95210 358 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 PDCP20941 246 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 NLRP11P59045 1033 aaKnown RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CUL4AQ13619 759 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 NBR1Q14596 966 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 SLC7A3Q8WY07 619 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CDX2Q99626 313 aaPredicted RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 OSMRQ99650 979 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 FTHL17Q9BXU8 183 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CDHR5Q9HBB8 845 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 PADI3Q9ULW8 664 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 POTEMA6NI47 508 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 K7ELQ4 463 aaPredicted RBP15.9■□□□□ 0.14
VAMP4-203ENST00000474047 GPR182O15218 404 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 SLITRK3O94933 977 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 GJB5O95377 273 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 POLGP54098 1239 aaPredicted RBP15.9■□□□□ 0.14
VAMP4-203ENST00000474047 NPEPPSP55786 919 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 CDC42EP1Q00587 391 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 RILPL1Q5EBL4 403 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 NLRP7Q8WX94 980 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 GUCD1Q96NT3 240 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 PPME1Q9Y570 386 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 INSL6Q9Y581 213 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 PCDHB6Q9Y5E3 794 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 MICAL3Q7RTP6 2002 aa15.9■□□□□ 0.14
VAMP4-203ENST00000474047 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 ENPP3O14638 875 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 MAFO75444 373 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 PTGDRQ13258 359 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 ZNF668Q96K58 619 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 YME1L1Q96TA2 773 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 GAS2L1Q99501 681 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 SUCLA2Q9P2R7 463 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 WRAP73Q9P2S5 460 aaPredicted RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 STXBP5LQ9Y2K9 1186 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
VAMP4-203ENST00000474047 LOXHD1Q8IVV2 1947 aa15.89■□□□□ 0.13
VAMP4-203ENST00000474047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.88■□□□□ 0.13
VAMP4-203ENST00000474047 GPR32O75388 356 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 HSP90AA1P07900 732 aaKnown RBP15.88■□□□□ 0.13
VAMP4-203ENST00000474047 IBSPP21815 317 aaPredicted RBP15.88■□□□□ 0.13
VAMP4-203ENST00000474047 RFC5P40937 340 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 TOB1P50616 345 aaPredicted RBP15.88■□□□□ 0.13
VAMP4-203ENST00000474047 HSCBQ8IWL3 235 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 HSD17B14Q9BPX1 270 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 PRDM12Q9H4Q4 367 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 LAMA3Q16787 3333 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 SIP14410 1827 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 DENND3A2RUS2 1198 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 LAD1O00515 517 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 FOSL2P15408 326 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 RHPN2Q8IUC4 686 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 LINC01465Q8N7H1 131 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 CERS4Q9HA82 394 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 TUFT1Q9NNX1 390 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 BMP2KQ9NSY1 1161 aaPredicted RBP15.88■□□□□ 0.13
VAMP4-203ENST00000474047 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
VAMP4-203ENST00000474047 ZBTB39O15060 712 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 EIF4BP23588 611 aaKnown RBP15.87■□□□□ 0.13
VAMP4-203ENST00000474047 GPC3P51654 580 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 HAUS3Q68CZ6 603 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 FAM43BQ6ZT52 329 aaPredicted RBP15.87■□□□□ 0.13
VAMP4-203ENST00000474047 ZNF579Q8NAF0 562 aaKnown RBP15.87■□□□□ 0.13
VAMP4-203ENST00000474047 TMEM40Q8WWA1 233 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 INTS4Q96HW7 963 aaKnown RBP15.87■□□□□ 0.13
VAMP4-203ENST00000474047 GCOM2Q9BZD3 368 aaPredicted RBP15.87■□□□□ 0.13
VAMP4-203ENST00000474047 ADAMTS10Q9H324 1103 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 ERVK-5Q9HDB9 667 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 ANKEF1Q9NU02 776 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 LRFN2Q9ULH4 789 aa15.87■□□□□ 0.13
VAMP4-203ENST00000474047 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 IGKV6-21A0A0C4DH24 114 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 LCHNA4D1U4 455 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 LYPLA2O95372 231 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 STAG3L1P0CL83 205 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 ZSCAN20P17040 1043 aaPredicted RBP15.86■□□□□ 0.13
VAMP4-203ENST00000474047 TAP1Q03518 808 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
VAMP4-203ENST00000474047 DRP2Q13474 957 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 DTHD1Q6ZMT9 781 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 PIGOQ8TEQ8 1089 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 ARNTL2Q8WYA1 636 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 TMEM143Q96AN5 459 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 CEP89Q96ST8 783 aa15.86■□□□□ 0.13
VAMP4-203ENST00000474047 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.86■□□□□ 0.13
VAMP4-203ENST00000474047 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms