RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CDY2AQ9Y6F7 541 aa13.85□□□□□ -0.19
DDX56-209ENST00000473924 ARHGEF35A5YM69 484 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 YEATS4O95619 227 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 FGBP02675 491 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 CHRNA1P02708 482 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 VTNP04004 478 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 ACTN1P12814 892 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 RARRES1P49788 294 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 EPHB4P54760 987 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 GRIN1Q05586 938 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 CALML4Q96GE6 196 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 MMTAG2Q9BU76 263 aaKnown RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 CELF4Q9BZC1 486 aaKnown RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 CSRNP2Q9H175 543 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 FBXO2Q9UK22 296 aaPredicted RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
DDX56-209ENST00000473924 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
DDX56-209ENST00000473924 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 EVPLQ92817 2033 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
DDX56-209ENST00000473924 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
DDX56-209ENST00000473924 NBNO60934 754 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 PPP6R2O75170 966 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 DGAT1O75907 488 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 TXLNAP40222 546 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 KRT85P78386 507 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 EMC2Q15006 297 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 ECM1Q16610 540 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 TRAF7Q6Q0C0 670 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 ZNF365Q70YC5 407 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 TDHQ8IZJ6 230 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 PLIN2Q99541 437 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 MTRQ99707 1265 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.83□□□□□ -0.24e-7■□□□□ 8.7
DDX56-209ENST00000473924 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 DHX33Q9H6R0 707 aaKnown RBP13.83□□□□□ -0.2
DDX56-209ENST00000473924 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
DDX56-209ENST00000473924 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
DDX56-209ENST00000473924 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.2
DDX56-209ENST00000473924 IGKV6-21A0A0C4DH24 114 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 E9PMD0 336 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 SLC26A4O43511 780 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 GHRP10912 638 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 ME1P48163 572 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
DDX56-209ENST00000473924 MGAT3Q09327 533 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 DRP2Q13474 957 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 MBTPS1Q14703 1052 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 SHHQ15465 462 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 KIZQ2M2Z5 673 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 C16orf59Q7L2K0 433 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 OTOP2Q7RTS6 562 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 RHPN2Q8IUC4 686 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
DDX56-209ENST00000473924 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
DDX56-209ENST00000473924 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
DDX56-209ENST00000473924 ZBBXA8MT70 800 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 CUTAO60888 179 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 EYA4O95677 639 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 CXCL10P02778 98 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX56-209ENST00000473924 DDIT3P35638 169 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 CRYBB1P53674 252 aaPredicted RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 CDC42EP1Q00587 391 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 GRB10Q13322 594 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 GPNMBQ14956 572 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 C9orf50Q5SZB4 431 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 HYIQ5T013 277 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 PADI6Q6TGC4 694 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 KCTD17Q8N5Z5 321 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 DBF4BQ8NFT6 615 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 SEPT8Q92599 483 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 SYMPKQ92797 1274 aaKnown RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms