RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 SLC30A4O14863 429 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 TGM1P22735 817 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 CA8P35219 290 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 PBX3P40426 434 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 IGBP1P78318 339 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 KRT76Q01546 638 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 GIT2Q14161 759 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 LRRC55Q6ZSA7 311 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 SLC39A11Q8N1S5 342 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 NME8Q8N427 588 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 SMARCAD1Q9H4L7 1026 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 VAT1LQ9HCJ6 419 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 PCDHA2Q9Y5H9 948 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 IRAK3Q9Y616 596 aa12.14□□□□□ -0.47
SSBP1-209ENST00000473783 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
SSBP1-209ENST00000473783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-209ENST00000473783 SMIM35A0A1B0GVV1 85 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 ZBTB5O15062 677 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 LAMTOR5O43504 91 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 CXCL14O95715 111 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
SSBP1-209ENST00000473783 INSRRP14616 1297 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 GLULP15104 373 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 TRAF1Q13077 416 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 C15orf39Q6ZRI6 1047 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 PPFIBP1Q86W92 1011 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 MIER1Q8N108 512 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 SLC44A3Q8N4M1 653 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 GPR152Q8TDT2 470 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 SLC22A17Q8WUG5 538 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 SEPT1Q8WYJ6 367 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
SSBP1-209ENST00000473783 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 KAT14Q9H8E8 782 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
SSBP1-209ENST00000473783 LAMA4Q16363 1823 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 GPR182O15218 404 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-209ENST00000473783 LILRB5O75023 590 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 FGAP02671 866 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 NT5C2P49902 561 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 FAM189BP81408 668 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 SHC2P98077 582 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 ESR2Q92731 530 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 ZBP1Q9H171 429 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 GMEB2Q9UKD1 530 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 NOC2LQ9Y3T9 749 aaKnown RBP12.12□□□□□ -0.47
SSBP1-209ENST00000473783 ZZEF1O43149 2961 aa12.12□□□□□ -0.47
SSBP1-209ENST00000473783 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
SSBP1-209ENST00000473783 PMLP29590 882 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-209ENST00000473783 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 FEZF2Q8TBJ5 459 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
SSBP1-209ENST00000473783 STAMQ92783 540 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 NELL1Q92832 810 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 SHDQ96IW2 340 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-209ENST00000473783 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-209ENST00000473783 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
SSBP1-209ENST00000473783 CARNS1A5YM72 827 aa12.1□□□□□ -0.47
SSBP1-209ENST00000473783 PROS1P07225 676 aa12.1□□□□□ -0.47
SSBP1-209ENST00000473783 CTSAP10619 480 aa12.1□□□□□ -0.47
SSBP1-209ENST00000473783 MS4A1P11836 297 aa12.1□□□□□ -0.47
SSBP1-209ENST00000473783 GBP2P32456 591 aaPredicted RBP12.1□□□□□ -0.47
SSBP1-209ENST00000473783 MAGEA9P43362 315 aa12.1□□□□□ -0.47
SSBP1-209ENST00000473783 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
SSBP1-209ENST00000473783 STARD6P59095 220 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms