RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 POMKQ9H5K3 350 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 TSHZ2Q9NRE2 1034 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 SPTBN4Q9H254 2564 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 CNTNAP5Q8WYK1 1306 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 BACH1O14867 736 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 SLC27A2O14975 620 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 HBP1O60381 514 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 ASGR2P07307 311 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 GNAQP50148 359 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 AAMPQ13685 434 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 PKN1Q16512 942 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 CLLU1OSQ5K130 101 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 CASC1Q6TDU7 716 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 KCNT2Q6UVM3 1135 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 MICU3Q86XE3 530 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 RASGRP4Q8TDF6 673 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 C1orf112Q9NSG2 853 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 TMEM161AQ9NX61 479 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
TRAF4-209ENST00000473421 IGLV3-22A0A075B6J6 115 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 RPLP2P05387 115 aaKnown RBP14.37□□□□□ -0.11
TRAF4-209ENST00000473421 FGFR4P22455 802 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 MCM5P33992 734 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 LIFRP42702 1097 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 CLCN3P51790 818 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 PLCB3Q01970 1234 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 TMEM87BQ96K49 555 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 CDCA3Q99618 268 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-209ENST00000473421 PRRX2Q99811 253 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 ADAMTS10Q9H324 1103 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 HCFC2Q9Y5Z7 792 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
TRAF4-209ENST00000473421 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-209ENST00000473421 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 GPR182O15218 404 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 CLASP2O75122 1294 aaKnown RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 CSDE1O75534 798 aaKnown RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 LAG3P18627 525 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 SREBF1P36956 1147 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 CLK2P49760 499 aaKnown RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 CRYBB1P53674 252 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 NAPAP54920 295 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 PDXDC2PQ6P474 469 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 TMEM173Q86WV6 379 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 CRYGNQ8WXF5 182 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 AUTS2Q8WXX7 1259 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 TMEM117Q9H0C3 514 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 ZNF302Q9NR11 478 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-209ENST00000473421 LZTS1Q9Y250 596 aa14.36□□□□□ -0.11
TRAF4-209ENST00000473421 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 C2orf71A6NGG8 1288 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 EDIL3O43854 480 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 SLC26A2P50443 739 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 NLRP11P59045 1033 aaKnown RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 NECTIN1Q15223 517 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 JAKMIP3Q5VZ66 844 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 TMC7Q7Z402 723 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 ZBTB33Q86T24 672 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 PLA2G4DQ86XP0 818 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 ECHDC2Q86YB7 292 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 TMTC2Q8N394 836 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 LRRC71Q8N4P6 559 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 LINC01465Q8N7H1 131 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 MRPL43Q8N983 215 aaKnown RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 RNF169Q8NCN4 708 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
TRAF4-209ENST00000473421 ELAC1Q9H777 363 aaKnown RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 MAFBQ9Y5Q3 323 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-209ENST00000473421 CALM1P0DP23 149 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 CALM2P0DP24 149 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 CALM3P0DP25 149 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 CDC27P30260 824 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 ADCY7P51828 1080 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 DRP2Q13474 957 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 FAM160B1Q5W0V3 765 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 APOA5Q6Q788 366 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 ZNF598Q86UK7 904 aaKnown RBP14.34□□□□□ -0.11
TRAF4-209ENST00000473421 SGMS1Q86VZ5 419 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 BCL7CQ8WUZ0 217 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-209ENST00000473421 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
TRAF4-209ENST00000473421 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 ADAM7Q9H2U9 754 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 SPG21Q9NZD8 308 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 LIMD1Q9UGP4 676 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
TRAF4-209ENST00000473421 COL1A2P08123 1366 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms