RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 RIC8AQ9NPQ8 531 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 DMDP11532 3685 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 MAFGO15525 162 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 ST18O60284 1047 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 ZNF862O60290 1169 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
MCF2L-223ENST00000473345 CDC27P30260 824 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 SREBF1P36956 1147 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 LIFRP42702 1097 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 PLCB3Q01970 1234 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 DRP2Q13474 957 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 SPOUT1Q5T280 376 aaKnown RBP10.97□□□□□ -0.65
MCF2L-223ENST00000473345 SWSAP1Q6NVH7 229 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 NME8Q8N427 588 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 KREMEN2Q8NCW0 462 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 RASGRP4Q8TDF6 673 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 AUTS2Q8WXX7 1259 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 LZTS2Q9BRK4 669 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 AZI2Q9H6S1 392 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM161AQ9NX61 479 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 HCFC2Q9Y5Z7 792 aa10.97□□□□□ -0.65
MCF2L-223ENST00000473345 DENND3A2RUS2 1198 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 C2orf71A6NGG8 1288 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 MEIS3P2A8K0S8 358 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 NT5C1B-RDH14C9J2C7 533 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 M0QZ92 97 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 HBP1O60381 514 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 CLASP2O75122 1294 aaKnown RBP10.96□□□□□ -0.65
MCF2L-223ENST00000473345 GNAQP50148 359 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 AAMPQ13685 434 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 UGCGQ16739 394 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 CREB3L3Q68CJ9 461 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 CWF19L1Q69YN2 538 aaKnown RBP10.96□□□□□ -0.65
MCF2L-223ENST00000473345 PDXDC2PQ6P474 469 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 APOA5Q6Q788 366 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
MCF2L-223ENST00000473345 SGMS1Q86VZ5 419 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 SLC39A11Q8N1S5 342 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 LRRC71Q8N4P6 559 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 ATOH1Q92858 354 aaPredicted RBP10.96□□□□□ -0.65
MCF2L-223ENST00000473345 GJA10Q969M2 543 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 PPP2R3CQ969Q6 453 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 LENG9Q96B70 501 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM87BQ96K49 555 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.65
MCF2L-223ENST00000473345 SDF4Q9BRK5 362 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 VN1R3Q9BXE9 311 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM150BA6NC51 233 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 PROB1E7EW31 1015 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-223ENST00000473345 PI15O43692 258 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 MCM5P33992 734 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 CRYBB1P53674 252 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-223ENST00000473345 NAPAP54920 295 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ADCK5Q3MIX3 580 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 JAKMIP3Q5VZ66 844 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 CASC1Q6TDU7 716 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ECHDC2Q86YB7 292 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 RUFY2Q8WXA3 655 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 MTA3Q9BTC8 594 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 TMEM117Q9H0C3 514 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ELAC1Q9H777 363 aaKnown RBP10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ATP6V0A4Q9HBG4 840 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF302Q9NR11 478 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-223ENST00000473345 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
MCF2L-223ENST00000473345 V9GY48 417 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-223ENST00000473345 ZFHX2Q9C0A1 2572 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-223ENST00000473345 COL1A2P08123 1366 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 CACNA1HO95180 2353 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 PRR23AA6NEV1 266 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 SMCO2A6NFE2 343 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 BACH1O14867 736 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 RPLP2P05387 115 aaKnown RBP10.94□□□□□ -0.66
MCF2L-223ENST00000473345 EPCAMP16422 314 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 NPR3P17342 541 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 LAG3P18627 525 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
MCF2L-223ENST00000473345 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF484Q5JVG2 852 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 MRPL43Q8N983 215 aaKnown RBP10.94□□□□□ -0.66
MCF2L-223ENST00000473345 HELQQ8TDG4 1101 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 CEP89Q96ST8 783 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 ADAM7Q9H2U9 754 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 EVPLQ92817 2033 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 DCHS1Q96JQ0 3298 aa10.94□□□□□ -0.66
MCF2L-223ENST00000473345 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms