RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 CAMK1Q14012 370 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 AAK1Q2M2I8 961 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 FAM102BQ5T8I3 360 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 NPAS4Q8IUM7 802 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 BANK1Q8NDB2 785 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.64e-7■□□□□ 10.3
USP40-212ENST00000473191 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 ADAM2Q99965 735 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 ADAMTS10Q9H324 1103 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 EML1O00423 815 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 FGFR4P22455 802 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 GTF2F1P35269 517 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP40-212ENST00000473191 CRYBB1P53674 252 aaPredicted RBP18.81■□□□□ 0.6
USP40-212ENST00000473191 NLRP11P59045 1033 aaKnown RBP18.81■□□□□ 0.6
USP40-212ENST00000473191 ST3GAL1Q11201 340 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP40-212ENST00000473191 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
USP40-212ENST00000473191 MIER3Q7Z3K6 550 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 CD320Q9NPF0 282 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 RGS18Q9NS28 235 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 DDX25Q9UHL0 483 aaKnown RBP18.81■□□□□ 0.6
USP40-212ENST00000473191 AKT3Q9Y243 479 aa18.81■□□□□ 0.6
USP40-212ENST00000473191 STK36Q9NRP7 1315 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 FNDC1Q4ZHG4 1894 aaPredicted RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 C9IYK1 514 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 H3BQ06 376 aaPredicted RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 CSDE1O75534 798 aaKnown RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 IL9P15248 144 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 ANAPC15P60006 121 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 TARBP2Q15633 366 aaKnown RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 PTPROQ16827 1216 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 PIK3AP1Q6ZUJ8 805 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 CMTR2Q8IYT2 770 aaKnown RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 WRAP73Q9P2S5 460 aaPredicted RBP18.8■□□□□ 0.6
USP40-212ENST00000473191 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
USP40-212ENST00000473191 FGFR1P11362 822 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 SFNP31947 248 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 JAK3P52333 1124 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 FOSBP53539 338 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 NR5A1Q13285 461 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 DSC3Q14574 896 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 GALNT17Q6IS24 598 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 KRT25Q7Z3Z0 450 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 FAM167AQ96KS9 214 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 NSUN3Q9H649 340 aaKnown RBP18.79■□□□□ 0.6
USP40-212ENST00000473191 NRBP2Q9NSY0 501 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 ORC3Q9UBD5 711 aaPredicted RBP18.79■□□□□ 0.6
USP40-212ENST00000473191 SEPT9Q9UHD8 586 aaPredicted RBP18.79■□□□□ 0.6
USP40-212ENST00000473191 VAV3Q9UKW4 847 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 PLAGL2Q9UPG8 496 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 PCDHGC5Q9Y5F6 944 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 PLXNA4Q9HCM2 1894 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 TTC28Q96AY4 2481 aa18.79■□□□□ 0.6
USP40-212ENST00000473191 DENND3A2RUS2 1198 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 WNT7AO00755 349 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 GPR182O15218 404 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 MAGEB2O15479 319 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 JAK2O60674 1132 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 ITGB1P05556 798 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 RB1P06400 928 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 IRS1P35568 1242 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 GPC3P51654 580 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
USP40-212ENST00000473191 LEXMQ3ZCV2 418 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 TIGD5Q53EQ6 642 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 PLA2G4FQ68DD2 849 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 MOXD1Q6UVY6 613 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 ZNF579Q8NAF0 562 aaKnown RBP18.78■□□□□ 0.6
USP40-212ENST00000473191 KLHL23Q8NBE8 558 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 HAS1Q92839 578 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 C11orf84Q9BUA3 381 aaPredicted RBP18.78■□□□□ 0.6
USP40-212ENST00000473191 KCNMB3Q9NPA1 279 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 RNF19AQ9NV58 838 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 LRFN2Q9ULH4 789 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 PCDHB7Q9Y5E2 793 aa18.78■□□□□ 0.6
USP40-212ENST00000473191 CCDC194A0A1B0GVG4 234 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 LINC01565O15544 149 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 CDKL5O76039 1030 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 STAG3L1P0CL83 205 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 LTBRP36941 435 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 HYAL1Q12794 435 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 EP400NLQ6ZTU2 488 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 ANO5Q75V66 913 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 ADGRD2Q7Z7M1 963 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 NEK8Q86SG6 692 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 TNFRSF25Q93038 417 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 GTF3C6Q969F1 213 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 NIFKQ9BYG3 293 aaKnown RBP18.77■□□□□ 0.6
USP40-212ENST00000473191 RAPGEFL1Q9UHV5 662 aa18.77■□□□□ 0.6
USP40-212ENST00000473191 MYO7AQ13402 2215 aa18.77■□□□□ 0.59
USP40-212ENST00000473191 BRWD1Q9NSI6 2320 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms