RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
SMC4-214ENST00000472991 ATP13A2Q9NQ11 1180 aa10.23□□□□□ -0.77
SMC4-214ENST00000472991 DISC1Q9NRI5 854 aa10.23□□□□□ -0.77
SMC4-214ENST00000472991 ZNF215Q9UL58 517 aaPredicted RBP10.23□□□□□ -0.77
SMC4-214ENST00000472991 ATP11BQ9Y2G3 1177 aa10.23□□□□□ -0.77
SMC4-214ENST00000472991 PCDHA10Q9Y5I2 948 aa10.23□□□□□ -0.77
SMC4-214ENST00000472991 IGKV6D-21A0A0A0MT36 114 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 EML1O00423 815 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 PQBP1O60828 265 aaKnown RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 SFNP31947 248 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 ATP2C1P98194 919 aaPredicted RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 UGCGQ16739 394 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 SWSAP1Q6NVH7 229 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 C4orf32Q8N8J7 132 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 SLC43A3Q8NBI5 491 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 RDM1Q8NG50 284 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 FTOQ9C0B1 505 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMC4-214ENST00000472991 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 ZNF302Q9NR11 478 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 ERAP1Q9NZ08 941 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 PCDHA12Q9UN75 941 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
SMC4-214ENST00000472991 IGSF9BQ9UPX0 1349 aa10.22□□□□□ -0.77
SMC4-214ENST00000472991 LAD1O00515 517 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 BRD1O95696 1058 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 CDK7P50613 346 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 STAT5BP51692 787 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 TLE2Q04725 743 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 PLCB4Q15147 1175 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.77
SMC4-214ENST00000472991 TMEM266Q2M3C6 531 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
SMC4-214ENST00000472991 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 FAM160B1Q5W0V3 765 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 PDXDC2PQ6P474 469 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 NFRKBQ6P4R8 1299 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 C7orf61Q8IZ16 206 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 C7orf31Q8N865 590 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 BANK1Q8NDB2 785 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 AFAP1L1Q8TED9 768 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 BAP1Q92560 729 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 USP28Q96RU2 1077 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 ZDHHC9Q9Y397 364 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 CLIC4Q9Y696 253 aa10.21□□□□□ -0.77
SMC4-214ENST00000472991 MROH7Q68CQ1 1323 aa10.21□□□□□ -0.78
SMC4-214ENST00000472991 TET1Q8NFU7 2136 aa10.21□□□□□ -0.78
SMC4-214ENST00000472991 ZNF862O60290 1169 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 B4GALT4O60513 344 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 BMP15O95972 392 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 SMIM10L2AP0DMW4 78 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 SMIM10L2BP0DMW5 78 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 PRPHP41219 470 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 TECP42680 631 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 PRKCEQ02156 737 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 EPHA7Q15375 998 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 GDF6Q6KF10 455 aaPredicted RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 PLPPR4Q7Z2D5 763 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 TRMT1LQ7Z2T5 733 aaKnown RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 SESTD1Q86VW0 696 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 FAM126BQ8IXS8 530 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 DPF3Q92784 378 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 RNPEPQ9H4A4 650 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 GTF2IRD1Q9UHL9 959 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
SMC4-214ENST00000472991 MAFBQ9Y5Q3 323 aaPredicted RBP10.2□□□□□ -0.78
SMC4-214ENST00000472991 C17orf102A2RUQ5 167 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 VWA3AA6NCI4 1184 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 DCDC2CA8MYV0 355 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 TLR3O15455 904 aaKnown RBP10.19□□□□□ -0.78
SMC4-214ENST00000472991 CLTBP09497 229 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 ATP4AP20648 1035 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 DDIT3P35638 169 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 SLC26A2P50443 739 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 IGBP1P78318 339 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 ZNF200P98182 395 aaPredicted RBP10.19□□□□□ -0.78
SMC4-214ENST00000472991 CYP4A11Q02928 519 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
SMC4-214ENST00000472991 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
SMC4-214ENST00000472991 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 PPFIA1Q13136 1202 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 PTPAQ15257 358 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 GRIK4Q16099 956 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 IL17AQ16552 155 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 DTHD1Q6ZMT9 781 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 ANKRD33Q7Z3H0 272 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 ATP8B4Q8TF62 1192 aa10.19□□□□□ -0.78
SMC4-214ENST00000472991 LMBR1Q8WVP7 490 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms