RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CTSHP09668 335 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 ACTN1P12814 892 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 POLGP54098 1239 aaPredicted RBP16.86■□□□□ 0.29
SNX13-205ENST00000471744 NPEPPSP55786 919 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
SNX13-205ENST00000471744 TDHQ8IZJ6 230 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 FTOQ9C0B1 505 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNX13-205ENST00000471744 DHX33Q9H6R0 707 aaKnown RBP16.86■□□□□ 0.29
SNX13-205ENST00000471744 SUGCTQ9HAC7 445 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
SNX13-205ENST00000471744 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
SNX13-205ENST00000471744 CDY2AQ9Y6F7 541 aa16.86■□□□□ 0.29
SNX13-205ENST00000471744 TMEM150BA6NC51 233 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 FGBP02675 491 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 CHRNA1P02708 482 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 UBA7P41226 1012 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 RARRES1P49788 294 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 CLCN3P51790 818 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 MGAT3Q09327 533 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 HYIQ5T013 277 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 DEFB128Q7Z7B8 93 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
SNX13-205ENST00000471744 LINC00301Q8NCQ3 95 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 ZBTB10Q96DT7 871 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 CELF4Q9BZC1 486 aaKnown RBP16.85■□□□□ 0.29
SNX13-205ENST00000471744 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
SNX13-205ENST00000471744 MICAL3Q7RTP6 2002 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 SPTLC2O15270 562 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 NBNO60934 754 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 EFCAB14O75071 495 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 PPP6R2O75170 966 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 ACRP10323 421 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
SNX13-205ENST00000471744 EPHB4P54760 987 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 EMC2Q15006 297 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 ODR4Q5SWX8 454 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 LRRC71Q8N4P6 559 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 KCNG4Q8TDN1 519 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 HERVK_113Q902F9 699 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 APBB2Q92870 758 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 CALML4Q96GE6 196 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 MTRQ99707 1265 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX13-205ENST00000471744 SH2D3AQ9BRG2 576 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 MMTAG2Q9BU76 263 aaKnown RBP16.84■□□□□ 0.29
SNX13-205ENST00000471744 ATP6V0A4Q9HBG4 840 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
SNX13-205ENST00000471744 FBXO2Q9UK22 296 aaPredicted RBP16.84■□□□□ 0.29
SNX13-205ENST00000471744 DNM3Q9UQ16 869 aa16.84■□□□□ 0.29
SNX13-205ENST00000471744 ARHGEF35A5YM69 484 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 PP2D1A8MPX8 630 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 ZBTB39O15060 712 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 CDC25AP30304 524 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 TXLNAP40222 546 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 CRYBB1P53674 252 aaPredicted RBP16.83■□□□□ 0.28
SNX13-205ENST00000471744 MBTPS1Q14703 1052 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 TSHZ1Q6ZSZ6 1077 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 C16orf59Q7L2K0 433 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 CABP7Q86V35 215 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 PSPC1Q8WXF1 523 aaKnown RBP16.83■□□□□ 0.28
SNX13-205ENST00000471744 SEPT8Q92599 483 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 RNPC3Q96LT9 517 aaKnown RBP16.83■□□□□ 0.28
SNX13-205ENST00000471744 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
SNX13-205ENST00000471744 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
SNX13-205ENST00000471744 ASAP2O43150 1006 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 EYA4O95677 639 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 VTNP04004 478 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 DDIT3P35638 169 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 KRT85P78386 507 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 TMEM62Q0P6H9 643 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 GPNMBQ14956 572 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 SHHQ15465 462 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 ECM1Q16610 540 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 PLEKHG4Q58EX7 1191 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 FBXO47Q5MNV8 452 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 ZNF410Q86VK4 478 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
SNX13-205ENST00000471744 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
SNX13-205ENST00000471744 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
SNX13-205ENST00000471744 MYH11P35749 1972 aa16.82■□□□□ 0.28
SNX13-205ENST00000471744 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 GPR32O75388 356 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 GHRP10912 638 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms