RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ABHD18Q0P651 414 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 KLF10Q13118 480 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 FHL2Q14192 279 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 ADGRE4PQ86SQ3 457 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 DDX53Q86TM3 631 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 D2HGDHQ8N465 521 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 ZNF808Q8N4W9 903 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 SHCBP1Q8NEM2 672 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 PMFBP1Q8TBY8 1022 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 AURKAIP1Q9NWT8 199 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 VWA7Q9Y334 891 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 PMS2P1A4D2B8 440 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 B4E1Z4 1266 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 SLC26A4O43511 780 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 KCNQ2O43526 872 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 KRT37O76014 449 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 KCNA6P17658 529 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 DUSP8Q13202 625 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 TMEM177Q53S58 311 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 CC2D1AQ6P1N0 951 aaPredicted RBP5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 BRAPQ7Z569 592 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 CFHR4Q92496 578 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 LPPQ93052 612 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 TMEM176AQ96HP8 235 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 MENTQ9BUN1 341 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 TLR9Q9NR96 1032 aa5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 SAE1Q9UBE0 346 aaPredicted RBP5.24□□□□□ -1.57
PRPF40A-207ENST00000471701 RASSF10A6NK89 507 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 GOLGA8BA8MQT2 603 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 CYP27B1O15528 508 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 ZNF202O95125 648 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 ACRV1P26436 265 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 ALDH6A1Q02252 535 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 ADAM15Q13444 863 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 TM4SF20Q53R12 229 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 KLHDC10Q6PID8 442 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 FGD2Q7Z6J4 655 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 GPR135Q8IZ08 494 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 JMYQ8N9B5 988 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 GFM2Q969S9 779 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 MPHOSPH9Q99550 1183 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 BOCQ9BWV1 1114 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 ING1Q9UK53 422 aaPredicted RBP5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 GIT1Q9Y2X7 761 aa5.23□□□□□ -1.57
PRPF40A-207ENST00000471701 CAPN14A8MX76 684 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 PLD2O14939 933 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 ZBTB48P10074 688 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 DGCR2P98153 550 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 ATP2C1P98194 919 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 ROM1Q03395 351 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 HGFACQ04756 655 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 CATSPEREQ5SY80 951 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 RABGGTAQ92696 567 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 GCDHQ92947 438 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 ACSS2Q9NR19 701 aa5.22□□□□□ -1.57
PRPF40A-207ENST00000471701 A0A1W2PRX2 142 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 M0R2C6 588 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 NARSO43776 548 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 KIF11P52732 1056 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 RIN1Q13671 783 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 SF3A1Q15459 793 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 ZNF174Q15697 407 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 C2orf27AQ580R0 203 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 FSTL4Q6MZW2 842 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 ABHD17CQ6PCB6 329 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 GSPT2Q8IYD1 628 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 FOXB1Q99853 325 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 SLC6A15Q9H2J7 730 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 NCOA5Q9HCD5 579 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 CABP5Q9NP86 173 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 PODXL2Q9NZ53 605 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 SAMD15Q9P1V8 674 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 MAGEL2Q9UJ55 1249 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 DENND2AQ9ULE3 1009 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 PTCH2Q9Y6C5 1203 aa5.21□□□□□ -1.58
PRPF40A-207ENST00000471701 DAPK3O43293 454 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 MAFO75444 373 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 CYP17A1P05093 508 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 C1SP09871 688 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 IGFALSP35858 605 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 FLT3P36888 993 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 RANGAP1P46060 587 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 FNTBP49356 437 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 SLC6A3Q01959 620 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 CRHR2Q13324 411 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 TUBA3CQ13748 450 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 DGKDQ16760 1214 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 TUBA3EQ6PEY2 450 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 OTOP1Q7RTM1 612 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 LILRB2Q8N423 598 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 FOXRED1Q96CU9 486 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 SLC7A6OSQ96CW6 309 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 RPL10LQ96L21 214 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 PCIF1Q9H4Z3 704 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 ZNF703Q9H7S9 590 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 AGO3Q9H9G7 860 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 TRIM39Q9HCM9 518 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms