RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SPATA20Q8TB22 786 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 SMARCE1Q969G3 411 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 KATNAL1Q9BW62 490 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 DHX33Q9H6R0 707 aaKnown RBP21.32■■□□□ 1
PSPC1-203ENST00000471658 HDAC6Q9UBN7 1215 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 TUBE1Q9UJT0 475 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 GRIN2DO15399 1336 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 SYCE3A1L190 88 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 HIP1RO75146 1068 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 SGPL1O95470 568 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 GUCY2CP25092 1073 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 POLGP54098 1239 aaPredicted RBP21.31■■□□□ 1
PSPC1-203ENST00000471658 ZNF200P98182 395 aaPredicted RBP21.31■■□□□ 1
PSPC1-203ENST00000471658 MAPK7Q13164 816 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 EMC2Q15006 297 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 KMT5BQ4FZB7 885 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 MARCH8Q5T0T0 291 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 U2AF1L4Q8WU68 220 aaKnown RBP21.31■■□□□ 1
PSPC1-203ENST00000471658 HPS3Q969F9 1004 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 VTI1AQ96AJ9 217 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 TSEN34Q9BSV6 310 aaKnown RBP21.31■■□□□ 1
PSPC1-203ENST00000471658 ZHX3Q9H4I2 956 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 MAN1B1Q9UKM7 699 aa21.31■■□□□ 1
PSPC1-203ENST00000471658 MAFO75444 373 aaPredicted RBP21.3■■□□□ 1
PSPC1-203ENST00000471658 DGAT1O75907 488 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 TFRCP02786 760 aaKnown RBP21.3■■□□□ 1
PSPC1-203ENST00000471658 MYL1P05976 194 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 GJB1P08034 283 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 KLRC1P26715 233 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 TBC1D8BQ0IIM8 1120 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 DRP2Q13474 957 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 FAM102BQ5T8I3 360 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 LRRC71Q8N4P6 559 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 LMBR1Q8WVP7 490 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 TMEM143Q96AN5 459 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 CRISPLD2Q9H0B8 497 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 ATP6V0A4Q9HBG4 840 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 PANK4Q9NVE7 773 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 ARID2Q68CP9 1835 aa21.3■■□□□ 1
PSPC1-203ENST00000471658 MOXD2PA6NHM9 499 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 SMC2O95347 1197 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 C22orf31O95567 290 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 RFC5P40937 340 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 MKRN4PQ13434 485 aaPredicted RBP21.29■■□□□ 1
PSPC1-203ENST00000471658 NT5DC1Q5TFE4 455 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 UNC13DQ70J99 1090 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 SUGCTQ9HAC7 445 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 KCND2Q9NZV8 630 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 COL1A2P08123 1366 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 A0A1W2PQ45 241 aaPredicted RBP21.29■■□□□ 1
PSPC1-203ENST00000471658 A0A1W2PQY0 241 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 KBTBD13C9JR72 458 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 MTHFD1LQ6UB35 978 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 C7orf31Q8N865 590 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 SLC7A3Q8WY07 619 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 PHF24Q9UPV7 400 aa21.29■■□□□ 1
PSPC1-203ENST00000471658 LOXHD1Q8IVV2 1947 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 SCN10AQ9Y5Y9 1956 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 IGKV6-21A0A0C4DH24 114 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 PVALEFA0A1B0GWK0 134 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 FRMD3A2A2Y4 597 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 DNM1LO00429 736 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 BMP6P22004 513 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
PSPC1-203ENST00000471658 COASYQ13057 564 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 FAM47CQ5HY64 1035 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 EFCAB12Q6NXP0 572 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 GSDMAQ96QA5 445 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 TBC1D7Q9P0N9 293 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 PPME1Q9Y570 386 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 NRCAMQ92823 1304 aa21.28■■□□□ 1
PSPC1-203ENST00000471658 RRN3P2A6NIE6 340 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 TREHO43280 583 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 CABYRO75952 493 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 FAM13AO94988 1023 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 CLCN3P51790 818 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 ADAM17P78536 824 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 ITGA7Q13683 1181 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 HERC4Q5GLZ8 1057 aaPredicted RBP21.27■■□□□ 1
PSPC1-203ENST00000471658 CCDC65Q8IXS2 484 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 METTL13Q8N6R0 699 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 MCPH1Q8NEM0 835 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 BSNDQ8WZ55 320 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 GLT1D1Q96MS3 346 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 POLR3FQ9H1D9 316 aaPredicted RBP21.27■■□□□ 1
PSPC1-203ENST00000471658 ODF2LQ9ULJ1 636 aa21.27■■□□□ 1
PSPC1-203ENST00000471658 C17orf102A2RUQ5 167 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 TBCAO75347 108 aaKnown RBP21.26■□□□□ 0.99
PSPC1-203ENST00000471658 LETM1O95202 739 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-203ENST00000471658 GJA8P48165 433 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 EHHADHQ08426 723 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 GDF6Q6KF10 455 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-203ENST00000471658 SFR1Q86XK3 245 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 MYCT1Q8N699 235 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 GLIS3Q8NEA6 775 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 FGFBP2Q9BYJ0 223 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 EXOC1Q9NV70 894 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 RHOBTB3O94955 611 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 HOXC8P31273 242 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 ARL2P36404 184 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms