RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 MTHFD1LQ6UB35 978 aa13.93□□□□□ -0.18
LINC00888-202ENST00000471496 DEFB128Q7Z7B8 93 aa13.93□□□□□ -0.18
LINC00888-202ENST00000471496 HERVK_113Q902F9 699 aa13.93□□□□□ -0.18
LINC00888-202ENST00000471496 CEP89Q96ST8 783 aa13.93□□□□□ -0.18
LINC00888-202ENST00000471496 TTC12Q9H892 705 aaPredicted RBP13.93□□□□□ -0.18
LINC00888-202ENST00000471496 CXXC1Q9P0U4 656 aaPredicted RBP13.93□□□□□ -0.18
LINC00888-202ENST00000471496 PCDHA2Q9Y5H9 948 aa13.93□□□□□ -0.18
LINC00888-202ENST00000471496 MICAL3Q7RTP6 2002 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 C22orf31O95567 290 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 FGBP02675 491 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 CHRNA1P02708 482 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 OATP04181 439 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 PFKMP08237 780 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 KLRC1P26715 233 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 MGAT3Q09327 533 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 ORC2Q13416 577 aaPredicted RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 PSRC1Q6PGN9 363 aaPredicted RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 CKAP2LQ8IYA6 745 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 RPUSD2Q8IZ73 545 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 TNPO1Q92973 898 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 RNPC3Q96LT9 517 aaKnown RBP13.92□□□□□ -0.18
LINC00888-202ENST00000471496 PCDHA12Q9UN75 941 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
LINC00888-202ENST00000471496 TMEM150BA6NC51 233 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 H3BQV1 296 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
LINC00888-202ENST00000471496 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 TXKP42681 527 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
LINC00888-202ENST00000471496 EPHA7Q15375 998 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
LINC00888-202ENST00000471496 NYAP1Q6ZVC0 841 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 LINC01465Q8N7H1 131 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 LRCH3Q96II8 777 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 FAM167AQ96KS9 214 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 NIFKQ9BYG3 293 aaKnown RBP13.91□□□□□ -0.18
LINC00888-202ENST00000471496 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
LINC00888-202ENST00000471496 NOL7Q9UMY1 257 aaKnown RBP13.91□□□□□ -0.18
LINC00888-202ENST00000471496 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 MARCH6O60337 910 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 CTSHP09668 335 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 OR52Z1P0C646 297 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 SYT1P21579 422 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
LINC00888-202ENST00000471496 PSMC5P62195 406 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 ANO5Q75V66 913 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 KIAA0319LQ8IZA0 1049 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 HSD17B14Q9BPX1 270 aa13.9□□□□□ -0.18
LINC00888-202ENST00000471496 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
LINC00888-202ENST00000471496 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
LINC00888-202ENST00000471496 SLITRK3O94933 977 aa13.89□□□□□ -0.19
LINC00888-202ENST00000471496 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
LINC00888-202ENST00000471496 XKR3Q5GH77 459 aa13.89□□□□□ -0.19
LINC00888-202ENST00000471496 DYDC2Q96IM9 177 aa13.89□□□□□ -0.19
LINC00888-202ENST00000471496 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
LINC00888-202ENST00000471496 SH2D3AQ9BRG2 576 aa13.89□□□□□ -0.19
LINC00888-202ENST00000471496 FAM49AQ9H0Q0 323 aaPredicted RBP13.89□□□□□ -0.19
LINC00888-202ENST00000471496 NRBP2Q9NSY0 501 aa13.89□□□□□ -0.19
LINC00888-202ENST00000471496 ZBTB39O15060 712 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 MRPS6P82932 125 aaKnown RBP13.88□□□□□ -0.19
LINC00888-202ENST00000471496 CYP4A11Q02928 519 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 PTGDRQ13258 359 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 IL17AQ16552 155 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 PLEKHG4Q58EX7 1191 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 RILPL1Q5EBL4 403 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 LXNQ9BS40 222 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC00888-202ENST00000471496 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 CHD7Q9P2D1 2997 aa13.88□□□□□ -0.19
LINC00888-202ENST00000471496 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 LYPLA2O95372 231 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 SPATA31C1P0DKV0 1188 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 PDCP20941 246 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 TECP42680 631 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 CTTNQ14247 550 aaKnown RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 LPIN1Q14693 890 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 CNKSR3Q6P9H4 555 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 NME8Q8N427 588 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 DBF4BQ8NFT6 615 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms