RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 PARNO95453 639 aaKnown RBP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 XRCC6P12956 609 aaKnown RBP eCLIP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 TMOD1P28289 359 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 RARRES1P49788 294 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 POLGP54098 1239 aaPredicted RBP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 C16orf59Q7L2K0 433 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 RPUSD2Q8IZ73 545 aaKnown RBP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 NME8Q8N427 588 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 BMP2KQ9NSY1 1161 aaPredicted RBP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 DDX19AQ9NUU7 478 aaKnown RBP28.11■■■□□ 2.09
COL15A1-203ENST00000471477 YEATS4O95619 227 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 VTNP04004 478 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 DRP2Q13474 957 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 ZRSR1Q15695 479 aaKnown RBP28.1■■■□□ 2.09
COL15A1-203ENST00000471477 IER5Q5VY09 327 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 ATL3Q6DD88 541 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 SLC7A3Q8WY07 619 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 CLIC6Q96NY7 704 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 MAP7D2Q96T17 732 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 CSRNP2Q9H175 543 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 DHX33Q9H6R0 707 aaKnown RBP28.1■■■□□ 2.09
COL15A1-203ENST00000471477 AKT3Q9Y243 479 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 KDM3AQ9Y4C1 1321 aa28.1■■■□□ 2.09
COL15A1-203ENST00000471477 M0QZ92 97 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 SPTLC2O15270 562 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 RFC5P40937 340 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 MKRN4PQ13434 485 aaPredicted RBP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 CABP7Q86V35 215 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 PPP1R16BQ96T49 567 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 JPH2Q9BR39 696 aaPredicted RBP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 OSBPL7Q9BZF2 842 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 DBR1Q9UK59 544 aaKnown RBP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 TRPV2Q9Y5S1 764 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 PFKMP08237 780 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 NUCB2P80303 420 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 EMC2Q15006 297 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 SPECC1Q5M775 1068 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 TMEM240Q5SV17 173 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 C9orf50Q5SZB4 431 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 PSRC1Q6PGN9 363 aaPredicted RBP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 KRI1Q8N9T8 703 aaKnown RBP28.09■■■□□ 2.09
COL15A1-203ENST00000471477 CHAMP1Q96JM3 812 aa28.09■■■□□ 2.09
COL15A1-203ENST00000471477 CXCL10P02778 98 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 UBA7P41226 1012 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 HYIQ5T013 277 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 ZNF365Q70YC5 407 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 EXOC8Q8IYI6 725 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 PNMA5Q96PV4 448 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 CELF4Q9BZC1 486 aaKnown RBP28.08■■■□□ 2.09
COL15A1-203ENST00000471477 CFAP45Q9UL16 551 aa28.08■■■□□ 2.09
COL15A1-203ENST00000471477 PPP6R2O75170 966 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 GRB10Q13322 594 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 SHHQ15465 462 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 HABP4Q5JVS0 413 aaKnown RBP28.07■■■□□ 2.08
COL15A1-203ENST00000471477 CDK5RAP3Q96JB5 506 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 PLIN2Q99541 437 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 TSHZ2Q9NRE2 1034 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 GINS2Q9Y248 185 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 ATP6V1DQ9Y5K8 247 aa28.07■■■□□ 2.08
COL15A1-203ENST00000471477 E9PMD0 336 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 USO1O60763 962 aaKnown RBP28.06■■■□□ 2.08
COL15A1-203ENST00000471477 DGAT1O75907 488 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 GHRP10912 638 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 DNM2P50570 870 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 KIZQ2M2Z5 673 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 KCNK18Q7Z418 384 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 TDHQ8IZJ6 230 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 EPSTI1Q96J88 318 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 MTRQ99707 1265 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 NT5C3AQ9H0P0 336 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 BHMT2Q9H2M3 363 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 ATP6V0A4Q9HBG4 840 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 XPNPEP1Q9NQW7 623 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 SUCLA2Q9P2R7 463 aaPredicted RBP28.06■■■□□ 2.08
COL15A1-203ENST00000471477 DNM3Q9UQ16 869 aa28.06■■■□□ 2.08
COL15A1-203ENST00000471477 ARHGEF35A5YM69 484 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 GPR32O75388 356 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 FGBP02675 491 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 NCLP19338 710 aaKnown RBP28.05■■■□□ 2.08
COL15A1-203ENST00000471477 TMEM119Q4V9L6 283 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 FBXO47Q5MNV8 452 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 USP49Q70CQ1 688 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 OTOP2Q7RTS6 562 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 KCNG4Q8TDN1 519 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 SYMPKQ92797 1274 aaKnown RBP28.05■■■□□ 2.08
COL15A1-203ENST00000471477 TMEM143Q96AN5 459 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 CALML4Q96GE6 196 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 CDHR5Q9HBB8 845 aa28.05■■■□□ 2.08
COL15A1-203ENST00000471477 RBM19Q9Y4C8 960 aaKnown RBP28.05■■■□□ 2.08
COL15A1-203ENST00000471477 MICAL3Q7RTP6 2002 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 SLC26A4O43511 780 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 GAS2O43903 313 aaKnown RBP28.04■■■□□ 2.08
COL15A1-203ENST00000471477 NLRP11P59045 1033 aaKnown RBP28.04■■■□□ 2.08
COL15A1-203ENST00000471477 KRT85P78386 507 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 LPIN1Q14693 890 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 ZNF668Q96K58 619 aaPredicted RBP28.04■■■□□ 2.08
COL15A1-203ENST00000471477 OSMRQ99650 979 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 CCSER1Q9C0I3 900 aa28.04■■■□□ 2.08
COL15A1-203ENST00000471477 EYA4O95677 639 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms