RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DYDC2Q96IM9 177 aa19.35■□□□□ 0.69
HSPG2-208ENST00000471322 RGL1Q9NZL6 768 aa19.35■□□□□ 0.69
HSPG2-208ENST00000471322 TCEAL9Q9UHQ7 104 aa19.35■□□□□ 0.69
HSPG2-208ENST00000471322 FRMD3A2A2Y4 597 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 KCNJ18B7U540 433 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 PSMC6P62333 389 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 SP2Q02086 613 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 KCNJ12Q14500 433 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 FSCN1Q16658 493 aaKnown RBP19.34■□□□□ 0.69
HSPG2-208ENST00000471322 SPECC1LQ69YQ0 1117 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 APTXQ7Z2E3 356 aaKnown RBP19.34■□□□□ 0.69
HSPG2-208ENST00000471322 MIER3Q7Z3K6 550 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 CSGALNACT2Q8N6G5 542 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 KLHDC9Q8NEP7 349 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 OR6J1Q8NGC5 347 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 CDHR1Q96JP9 859 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 BCAS3Q9H6U6 928 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 KCND2Q9NZV8 630 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 PCDH10Q9P2E7 1040 aa19.34■□□□□ 0.69
HSPG2-208ENST00000471322 DHX15O43143 795 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 P4HBP07237 508 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 ASGR1P07306 291 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 COL6A1P12109 1028 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 LRRC63Q05C16 580 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 ARSHQ5FYA8 562 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 HERC4Q5GLZ8 1057 aaPredicted RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 MYOCDQ8IZQ8 938 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 KIAA1524Q8TCG1 905 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 DPF3Q92784 378 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 SRRTQ9BXP5 876 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 UPF3AQ9H1J1 476 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 RTN4Q9NQC3 1192 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 INTS13Q9NVM9 706 aa19.33■□□□□ 0.69
HSPG2-208ENST00000471322 DDX41Q9UJV9 622 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 LAMA2P24043 3122 aaKnown RBP19.33■□□□□ 0.69
HSPG2-208ENST00000471322 KIAA1217Q5T5P2 1943 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 SFNP31947 248 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 ACLYP53396 1101 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 PMS1P54277 932 aaKnown RBP19.33■□□□□ 0.68
HSPG2-208ENST00000471322 GIT2Q14161 759 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 CTTNQ14247 550 aaKnown RBP19.33■□□□□ 0.68
HSPG2-208ENST00000471322 KRT31Q15323 416 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 ANKRD40Q6AI12 368 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 CXCL17Q6UXB2 119 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 RDM1Q8NG50 284 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 INPP4AQ96PE3 977 aaPredicted RBP19.33■□□□□ 0.68
HSPG2-208ENST00000471322 TSG101Q99816 390 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 BHMT2Q9H2M3 363 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 ZSWIM4Q9H7M6 989 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 PKD2L1Q9P0L9 805 aa19.33■□□□□ 0.68
HSPG2-208ENST00000471322 TRIM49BA6NDI0 452 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 N4BP3O15049 544 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 TPM2P07951 284 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 GAP43P17677 238 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 JAK3P52333 1124 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 KRT76Q01546 638 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 ITGB3BPQ13352 177 aaPredicted RBP19.32■□□□□ 0.68
HSPG2-208ENST00000471322 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
HSPG2-208ENST00000471322 HPS3Q969F9 1004 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 VTI1AQ96AJ9 217 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 DUSP9Q99956 384 aaKnown RBP19.32■□□□□ 0.68
HSPG2-208ENST00000471322 COL4A3BPQ9Y5P4 624 aa19.32■□□□□ 0.68
HSPG2-208ENST00000471322 A0A1W2PQ45 241 aaPredicted RBP19.31■□□□□ 0.68
HSPG2-208ENST00000471322 A0A1W2PQY0 241 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 UBA1P22314 1058 aaKnown RBP19.31■□□□□ 0.68
HSPG2-208ENST00000471322 COPB1P53618 953 aaKnown RBP19.31■□□□□ 0.68
HSPG2-208ENST00000471322 LRMPQ12912 555 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 LRRC26Q2I0M4 334 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 GNPTABQ3T906 1256 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 IRF2BP1Q8IU81 584 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 PHF24Q9UPV7 400 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 PCDHA2Q9Y5H9 948 aa19.31■□□□□ 0.68
HSPG2-208ENST00000471322 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.68
HSPG2-208ENST00000471322 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
HSPG2-208ENST00000471322 LYPLA2O95372 231 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 GGPS1O95749 300 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 SKILP12757 684 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 CAPN2P17655 700 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 SP4Q02446 784 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 ARHGAP1Q07960 439 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 TBX2Q13207 712 aaPredicted RBP19.3■□□□□ 0.68
HSPG2-208ENST00000471322 RINT1Q6NUQ1 792 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 DHX37Q8IY37 1157 aaKnown RBP19.3■□□□□ 0.68
HSPG2-208ENST00000471322 CCDC112Q8NEF3 446 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 PPP1R13LQ8WUF5 828 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 LXNQ9BS40 222 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 SEMA6BQ9H3T3 888 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 Q9Y3F1 56 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 LAMA3Q16787 3333 aa19.3■□□□□ 0.68
HSPG2-208ENST00000471322 NPHP3-ACAD11A0A0J9YXS1 232 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 WDR64B1ANS9 1081 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 SPATA31C2B4DYI2 1134 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 GH1P01241 217 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 MYL3P08590 195 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 CST5P28325 142 aaPredicted RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 QARSP47897 775 aaKnown RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 CHMP4BP1P59074 171 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 NOLC1Q14978 699 aaKnown RBP eCLIP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms