RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CHST14Q8NCH0 376 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 HIPK4Q8NE63 616 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 SH3TC2Q8TF17 1288 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 UBXN4Q92575 508 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 DLG3Q92796 817 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 NEIL1Q96FI4 390 aaPredicted RBP2.19□□□□□ -2.06
UBXN4-207ENST00000471246 MRFAP1L1Q96HT8 127 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 WNK4Q96J92 1243 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 GNRHR2Q96P88 292 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 GBP4Q96PP9 640 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 LMF1Q96S06 567 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 BOCQ9BWV1 1114 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 BTBD2Q9BX70 525 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 AMNQ9BXJ7 453 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 CARD11Q9BXL7 1154 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 ZDHHC5Q9C0B5 715 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 OR10A5Q9H207 317 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 ZSWIM4Q9H7M6 989 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 KANSL2Q9H9L4 492 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 SEC61A2Q9H9S3 476 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 FBXO10Q9UK96 956 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 OAZ3Q9UMX2 235 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 TCAF1Q9Y4C2 921 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 ASB1Q9Y576 335 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 A0A0G2JNJ9 132 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 PRAMEF22A3QJZ6 481 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 B4E1Z4 1266 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 OPA1O60313 960 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 ASLP04424 464 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 ZBTB48P10074 688 aaPredicted RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 ECE1P42892 770 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 RAC3P60763 192 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 CD83Q01151 205 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 TBR1Q16650 682 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 CCDC144BQ3MJ40 725 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 FNDC3BQ53EP0 1204 aaKnown RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 ZMAT1Q5H9K5 638 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 AGBL4Q5VU57 503 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 PAPD7Q5XG87 772 aaKnown RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 TMEM200BQ69YZ2 307 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 GRAMD4Q6IC98 578 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 TCTN3Q6NUS6 607 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 PCSK4Q6UW60 755 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 LARP4Q71RC2 724 aaKnown RBP eCLIP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 CXXC5Q7LFL8 322 aaKnown RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 OTOP1Q7RTM1 612 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 DDX53Q86TM3 631 aaKnown RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 RTN4RL1Q86UN2 441 aaPredicted RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 GIMAP8Q8ND71 665 aaPredicted RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 WDR48Q8TAF3 677 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 ERCC4Q92889 916 aaPredicted RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 SCYL1Q96KG9 808 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 CLUHP3Q96NS8 147 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 DPYSL5Q9BPU6 564 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 PIF1Q9H611 641 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 TMEM260Q9NX78 707 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 SAMD15Q9P1V8 674 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 Q9UFV3 132 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 CDC42EP3Q9UKI2 254 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 NR2E1Q9Y466 385 aa2.18□□□□□ -2.06
UBXN4-207ENST00000471246 TNPO3Q9Y5L0 923 aaKnown RBP2.18□□□□□ -2.06
UBXN4-207ENST00000471246 PROB1E7EW31 1015 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 GOLGA6L22H0YM25 854 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MATN2O00339 956 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 DVL2O14641 736 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PPP1R12AO14974 1030 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 ARHGAP6O43182 974 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 FOXS1O43638 330 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 CDC14BO60729 498 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF623O75123 536 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MAFO75444 373 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 ASMTLO95671 621 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PRLP01236 227 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 SDSP20132 328 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MCM7P33993 719 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 FNTBP49356 437 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MRE11P49959 708 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MEOX1P50221 254 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 STAT5BP51692 787 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 KIF11P52732 1056 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 ALDH6A1Q02252 535 aaKnown RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PABPC4Q13310 644 aaKnown RBP eCLIP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 MOGSQ13724 837 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 NFYCQ13952 458 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 NOLC1Q14978 699 aaKnown RBP eCLIP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 EIF4HQ15056 248 aaKnown RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PCOLCEQ15113 449 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PIK3R6Q5UE93 754 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 ZKSCAN2Q63HK3 967 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 CC2D1AQ6P1N0 951 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 FILIP1Q7Z7B0 1213 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 TAX1BP1Q86VP1 789 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 RTKN2Q8IZC4 609 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 FUKQ8N0W3 1084 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 OR5AN1Q8NGI8 311 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 OR14K1Q8NGZ2 314 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 Q8TCH9 128 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 CALML6Q8TD86 181 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 NEU4Q8WWR8 484 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 CFHR4Q92496 578 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms