RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 GJB1P08034 283 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
FN1-217ENST00000471193 POLGP54098 1239 aaPredicted RBP12.9□□□□□ -0.34
FN1-217ENST00000471193 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
FN1-217ENST00000471193 MAPK7Q13164 816 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 GIT2Q14161 759 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 GRIK4Q16099 956 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 DAW1Q8N136 415 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
FN1-217ENST00000471193 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 TRAPPC12Q8WVT3 735 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 BMP2KQ9NSY1 1161 aaPredicted RBP12.9□□□□□ -0.34
FN1-217ENST00000471193 ODF2LQ9ULJ1 636 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
FN1-217ENST00000471193 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 IGKV6-21A0A0C4DH24 114 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 RRN3P2A6NIE6 340 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 RSPH10B2B2RC85 870 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 HIP1RO75146 1068 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 LETM1O95202 739 aaPredicted RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 SGPL1O95470 568 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 RSPH10BP0C881 870 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 ZNF131P52739 623 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 IGBP1P78318 339 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 EHHADHQ08426 723 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 TBC1D8BQ0IIM8 1120 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 COASYQ13057 564 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 KCNB1Q14721 858 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
FN1-217ENST00000471193 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
FN1-217ENST00000471193 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 SYCE3A1L190 88 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 MBLAC1A4D2B0 266 aaPredicted RBP12.88□□□□□ -0.35
FN1-217ENST00000471193 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 IDEP14735 1019 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 GJA8P48165 433 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
FN1-217ENST00000471193 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 ADAM17P78536 824 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 HIC1Q14526 733 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 CCDC65Q8IXS2 484 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 PANK4Q9NVE7 773 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
FN1-217ENST00000471193 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 MAGEB2O15479 319 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 FAM13AO94988 1023 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 GAP43P17677 238 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 SOX10P56693 466 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 RTP1P59025 263 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
FN1-217ENST00000471193 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
FN1-217ENST00000471193 MORC3Q14149 939 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 FAM102BQ5T8I3 360 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
FN1-217ENST00000471193 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
FN1-217ENST00000471193 POLR3FQ9H1D9 316 aaPredicted RBP12.87□□□□□ -0.35
FN1-217ENST00000471193 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
FN1-217ENST00000471193 SEL1LQ9UBV2 794 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms