RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 PLAGL2Q9UPG8 496 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 TBX3O15119 743 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 AGTP01019 485 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 GARSP41250 739 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 ENOSF1Q7L5Y1 443 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 GSPT2Q8IYD1 628 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 RAB3IL1Q8TBN0 382 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 RBM41Q96IZ5 413 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 POC1B-GALNT4F8VUJ3 575 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 GMNNO75496 209 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 IRAK1P51617 712 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 TBX2Q13207 712 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 ZKSCAN8Q15776 578 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 NTRK3Q16288 839 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 NUGGCQ68CJ6 796 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 PCGF5Q86SE9 256 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 RIC1Q4ADV7 1423 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 DAPK3O43293 454 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 MYBL1P10243 752 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 ALAS1P13196 640 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 SLC16A2P36021 539 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 E2F5Q15329 346 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 HSP90AA5PQ58FG0 334 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 N4BP2L2Q92802 583 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 ELAC2Q9BQ52 826 aaKnown RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 TESPA1A2RU30 521 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 MEIS1O00470 390 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 CASQ2O14958 399 aaPredicted RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 NCK2O43639 380 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■■■■□ 20.2
RRP1B-202ENST00000470886 PLCB4Q15147 1175 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 TMED2Q15363 201 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 NAB2Q15742 525 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 XXYLT1Q8NBI6 393 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 MED7O43513 233 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 KIF1CO43896 1103 aaKnown RBP11.32□□□□□ -0.6
RRP1B-202ENST00000470886 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 FCER1AP12319 257 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 SOX5P35711 763 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 PSMC4P43686 418 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 SCNN1DP51172 638 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 PRELPP51888 382 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 CFAP61Q8NHU2 1237 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 CD2APQ9Y5K6 639 aa11.32□□□□□ -0.6
RRP1B-202ENST00000470886 BCL9O00512 1426 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 NMT2O60551 498 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 HNRNPCL1O60812 293 aaKnown RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TTC13Q8NBP0 860 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SENP1Q9P0U3 644 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 THEGQ9P2T0 379 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 FBXL5Q9UKA1 691 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 ANGPTL2Q9UKU9 493 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 IQANK1A0A1B0GTG1 560 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 E9PMD0 336 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SGK1O00141 431 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PPARDQ03181 441 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TAF11Q15544 211 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 FAM160B1Q5W0V3 765 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 DCAF15Q66K64 600 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM65Q6PJ69 517 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 ZNF473Q8WTR7 871 aaKnown RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PITPNM3Q9BZ71 974 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 UBE4BO95155 1302 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TJP3O95049 919 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 NTSR2O95665 410 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms