RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
SREBF1-209ENST00000470247 DGAT1O75907 488 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 CABYRO75952 493 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 C22orf31O95567 290 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-209ENST00000470247 MYL1P05976 194 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 SOX10P56693 466 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-209ENST00000470247 AMPD3Q01432 767 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-209ENST00000470247 EHHADHQ08426 723 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 PPFIA1Q13136 1202 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 DRP2Q13474 957 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 GRIK4Q16099 956 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 SLC43A3Q8NBI5 491 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 LMBR1Q8WVP7 490 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 GPRC5CQ9NQ84 441 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 KCND2Q9NZV8 630 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 COL1A2P08123 1366 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-209ENST00000470247 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 RRN3P2A6NIE6 340 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 SFI1A8K8P3 1242 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 HIP1RO75146 1068 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 KLRC1P26715 233 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 ARL2P36404 184 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 RFC5P40937 340 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 ZNF131P52739 623 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 EMC2Q15006 297 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 MTHFD1LQ6UB35 978 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 UNC13DQ70J99 1090 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 FIZ1Q96SL8 496 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-209ENST00000470247 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 NRCAMQ92823 1304 aa12.5□□□□□ -0.41
SREBF1-209ENST00000470247 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
SREBF1-209ENST00000470247 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
SREBF1-209ENST00000470247 COL6A1P12109 1028 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 BMP6P22004 513 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 CDK7P50613 346 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 IGBP1P78318 339 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 ASIC1P78348 528 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
SREBF1-209ENST00000470247 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 BSNDQ8WZ55 320 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 ATP6V0A4Q9HBG4 840 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
SREBF1-209ENST00000470247 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 MAGEB2O15479 319 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 TREHO43280 583 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-209ENST00000470247 COASYQ13057 564 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 KCNB1Q14721 858 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 C7orf31Q8N865 590 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
SREBF1-209ENST00000470247 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 SYAP1Q96A49 352 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-209ENST00000470247 CCDC34Q96HJ3 373 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 GLT1D1Q96MS3 346 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 FUCA2Q9BTY2 467 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 HOOK1Q9UJC3 728 aaKnown RBP12.48□□□□□ -0.41
SREBF1-209ENST00000470247 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
SREBF1-209ENST00000470247 TRIP12Q14669 1992 aaPredicted RBP12.47□□□□□ -0.41
SREBF1-209ENST00000470247 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
SREBF1-209ENST00000470247 C17orf102A2RUQ5 167 aa12.47□□□□□ -0.41
SREBF1-209ENST00000470247 ARVCFO00192 962 aa12.47□□□□□ -0.41
SREBF1-209ENST00000470247 SMC2O95347 1197 aa12.47□□□□□ -0.41
SREBF1-209ENST00000470247 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
SREBF1-209ENST00000470247 IDEP14735 1019 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms