RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 KIAA0355O15063 1070 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 POLR2DO15514 142 aaKnown RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 CYP11B2P19099 503 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 STAT6P42226 847 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 CLCN3P51790 818 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 NDUFA8P51970 172 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 POLGP54098 1239 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 RBL2Q08999 1139 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 MCM6Q14566 821 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 EMC2Q15006 297 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 RPAINQ86UA6 219 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 METTL13Q8N6R0 699 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 DNAJB3Q8WWF6 145 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 SLC7A3Q8WY07 619 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 LARP4BQ92615 738 aaKnown RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 DPF3Q92784 378 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 TRIM43Q96BQ3 446 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 DHX58Q96C10 678 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 NOC4LQ9BVI4 516 aaKnown RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 FAM49AQ9H0Q0 323 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-206ENST00000470241 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 TMEM39AQ9NV64 488 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
SMC1A-206ENST00000470241 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 EVI5O60447 810 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 PRPF40AO75400 957 aaKnown RBP11.74□□□□□ -0.53
SMC1A-206ENST00000470241 SSBP05455 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMC1A-206ENST00000470241 ITGB8P26012 769 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 THPOP40225 353 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 DHX8Q14562 1220 aaKnown RBP11.74□□□□□ -0.53
SMC1A-206ENST00000470241 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 TRAF7Q6Q0C0 670 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 MAEAQ7L5Y9 396 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 MTRQ99707 1265 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
SMC1A-206ENST00000470241 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 PRDM5Q9NQX1 630 aaPredicted RBP11.74□□□□□ -0.53
SMC1A-206ENST00000470241 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 UMODL1Q5DID0 1318 aa11.74□□□□□ -0.53
SMC1A-206ENST00000470241 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
SMC1A-206ENST00000470241 GAS2O43903 313 aaKnown RBP11.73□□□□□ -0.53
SMC1A-206ENST00000470241 CAND2O75155 1236 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 VTNP04004 478 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 CKBP12277 381 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 TMOD1P28289 359 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 CYP2C18P33260 490 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 ARL2P36404 184 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 SYKP43405 635 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 MGAT3Q09327 533 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 BFSP2Q13515 415 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 FAM26DQ5JW98 314 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 ZNF618Q5T7W0 954 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 IER5Q5VY09 327 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 NME8Q8N427 588 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 MCPH1Q8NEM0 835 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 ENGASEQ8NFI3 743 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 PYM1Q9BRP8 204 aaKnown RBP11.73□□□□□ -0.53
SMC1A-206ENST00000470241 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 SUCLA2Q9P2R7 463 aaPredicted RBP11.73□□□□□ -0.53
SMC1A-206ENST00000470241 SERTAD1Q9UHV2 236 aa11.73□□□□□ -0.53
SMC1A-206ENST00000470241 NPHP3-ACAD11A0A0J9YXS1 232 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 MYMKA6NI61 221 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 GPR32O75388 356 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 TIMP1P01033 207 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 CHRNA1P02708 482 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 RPLP2P05387 115 aaKnown RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 CTSHP09668 335 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 SLFN14P0C7P3 912 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 SELPP16109 830 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 LIG1P18858 919 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 DNM2P50570 870 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 UBE2HP62256 183 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 MAPK7Q13164 816 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms