RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TMEM117Q9H0C3 514 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 TMEM161AQ9NX61 479 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 DLL3Q9NYJ7 618 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 MAD2L2Q9UI95 211 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 HCFC2Q9Y5Z7 792 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 FNDC1Q4ZHG4 1894 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 DOCK5Q9H7D0 1870 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 C9IYK1 514 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 CLASP2O75122 1294 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 CXCL14O95715 111 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 NPR3P17342 541 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 FAM189BP81408 668 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 NMIQ13287 307 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 IMMTQ16891 758 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 TMEM266Q2M3C6 531 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 SIX5Q8N196 739 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 RIOX1Q9H6W3 641 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 IGSF9Q9P2J2 1179 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 DUSP12Q9UNI6 340 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 GINS2Q9Y248 185 aa10.18□□□□□ -0.78
SYNGAP1-205ENST00000470232 LOXHD1Q8IVV2 1947 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 EPG5Q9HCE0 2579 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 C2orf71A6NGG8 1288 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 ATP9AO75110 1047 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 KCNA2P16389 499 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 TBC1D8BQ0IIM8 1120 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 RSPO4Q2I0M5 234 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 KIAA0319Q5VV43 1072 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 MTHFD1LQ6UB35 978 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 PLPPR4Q7Z2D5 763 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 PPFIBP1Q86W92 1011 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 SMC5Q8IY18 1101 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 ERVK-5Q9HDB9 667 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 WNT16Q9UBV4 365 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 NOC2LQ9Y3T9 749 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 TELO2Q9Y4R8 837 aa10.17□□□□□ -0.78
SYNGAP1-205ENST00000470232 ERICH2A1L162 156 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 PIK3CDO00329 1044 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 MGEA5O60502 916 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 WEE2P0C1S8 567 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 FGFR1P11362 822 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 ZSCAN20P17040 1043 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 ALDH7A1P49419 539 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 SLC26A2P50443 739 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 STAT5BP51692 787 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 TRDNQ13061 729 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 MTMR1Q13613 665 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 PLCB4Q15147 1175 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 CCDC149Q6ZUS6 474 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 CABP7Q86V35 215 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 C12orf76Q8N812 135 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 RILPL2Q969X0 211 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 TMEM169Q96HH4 297 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 KCNK12Q9HB15 430 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 SLC9A2Q9UBY0 812 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 CDH22Q9UJ99 828 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 R4GN57 208 aa10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 TPRP12270 2363 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-205ENST00000470232 KMT2BQ9UMN6 2715 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 PRR5-ARHGAP8B1AHC4 643 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 HBP1O60381 514 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 KINO60870 393 aaKnown RBP10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 KLRC1P26715 233 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 CRYBB1P53674 252 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 PDE1AP54750 535 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 ARHGAP8P85298 464 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 GRM4Q14833 912 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 USP17L6PQ6QN14 398 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 NXPE3Q969Y0 559 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 ZBTB10Q96DT7 871 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 C22orf23Q9BZE7 217 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 SLKQ9H2G2 1235 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 JPH1Q9HDC5 661 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
SYNGAP1-205ENST00000470232 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 POLGP54098 1239 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 NUCB1Q02818 461 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 SEC23AQ15436 765 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 ST3GAL2Q16842 350 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 TMC5Q6UXY8 1006 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 C1orf210Q8IVY1 113 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 VPS52Q8N1B4 723 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZNF710Q8N1W2 664 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms