RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 PIGOQ8TEQ8 1089 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 EPSTI1Q96J88 318 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 CLIC6Q96NY7 704 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 LBHD1Q9BQE6 289 aaPredicted RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 RSPH10B2B2RC85 870 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 RSPH10BP0C881 870 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 CKBP12277 381 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 SCP2P22307 547 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 THPOP40225 353 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 NPEPPSP55786 919 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 GRIN1Q05586 938 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 POU5F1BQ06416 359 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 GRB10Q13322 594 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 HIC1Q14526 733 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 ODR4Q5SWX8 454 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 RESP18Q5W5W9 173 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 LINC01465Q8N7H1 131 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 BHMT2Q9H2M3 363 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 C17orf75Q9HAS0 396 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 MAGEF1Q9HAY2 307 aa14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 PRDM5Q9NQX1 630 aaPredicted RBP14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
SPTLC1-204ENST00000469778 FAM237AA0A1B0GTK4 181 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 GUCY2CP25092 1073 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 MRPS6P82932 125 aaKnown RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 AMPD3Q01432 767 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 EMC2Q15006 297 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 PCBP1Q15365 356 aaKnown RBP eCLIP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 ZRSR1Q15695 479 aaKnown RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 ECM1Q16610 540 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 PLA2G4FQ68DD2 849 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 SHC4Q6S5L8 630 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 LRRC8DQ7L1W4 858 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 ZNF410Q86VK4 478 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 KIFAP3Q92845 792 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 TRIM43Q96BQ3 446 aaPredicted RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 MTRQ99707 1265 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 DNAH12Q6ZR08 3092 aa14.04□□□□□ -0.16
SPTLC1-204ENST00000469778 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 ZBTB39O15060 712 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 PLCG1P19174 1290 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 STAT6P42226 847 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 CRYBB1P53674 252 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.163e-8■■■□□ 17.7
SPTLC1-204ENST00000469778 TFDP1Q14186 410 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 PPP2R5AQ15172 486 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 USP49Q70CQ1 688 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 SV2BQ7L1I2 683 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 SH3RF1Q7Z6J0 888 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 TMEM87AQ8NBN3 555 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 LARP4BQ92615 738 aaKnown RBP14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 RAD54LQ92698 747 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 CELF4Q9BZC1 486 aaKnown RBP14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 WDR81Q562E7 1941 aa14.03□□□□□ -0.16
SPTLC1-204ENST00000469778 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 TMEM150BA6NC51 233 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 E9PMD0 336 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 MYL1P05976 194 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 ABCD1P33897 745 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 ARL2P36404 184 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 SLC12A3P55017 1021 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 FPGSQ05932 587 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 ZNF618Q5T7W0 954 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 RINT1Q6NUQ1 792 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 RUFY4Q6ZNE9 571 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 C1orf186Q6ZWK4 172 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 PPP1R13LQ8WUF5 828 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 PRPF31Q8WWY3 499 aaKnown RBP14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 NFKBIZQ9BYH8 718 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 FAM49AQ9H0Q0 323 aaPredicted RBP14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 ODF2LQ9ULJ1 636 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 TRPV2Q9Y5S1 764 aa14.02□□□□□ -0.17
SPTLC1-204ENST00000469778 EFCAB14O75071 495 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 CHRNA1P02708 482 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 CXCL10P02778 98 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 CYP2C18P33260 490 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 SLC17A8Q8NDX2 589 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms