RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PITPNM2Q9BZ72 1349 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 DOCK2Q92608 1830 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 E2F6O75461 281 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 ZFXP17010 805 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 GM2AP17900 193 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 RASA1P20936 1047 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 ANXA13P27216 316 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 POLGP54098 1239 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 RNASE9P60153 205 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 ZC3H18Q86VM9 953 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 NELFCDQ8IXH7 590 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 NME8Q8N427 588 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 LRRC57Q8N9N7 239 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 ZBTB8BQ8NAP8 495 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 RMDN2Q96LZ7 410 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 PPP1R12CQ9BZL4 782 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 TMEM165Q9HC07 324 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 LRRC4CQ9HCJ2 640 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 PACSIN2Q9UNF0 486 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-207ENST00000469334 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 BTBD19C9JJ37 291 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 RASGRF2O14827 1237 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PTENP60484 403 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 USP46P62068 366 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 KLRC3Q07444 240 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 AP1B1Q10567 949 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 TCIRG1Q13488 830 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 AUHQ13825 339 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 USH1GQ495M9 461 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 EARS2Q5JPH6 523 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 AKNAD1Q5T1N1 836 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 DAB2IPQ5VWQ8 1189 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 CNNM4Q6P4Q7 775 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 COPS6Q7L5N1 327 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ECHDC2Q86YB7 292 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF654Q8IZM8 581 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 C17orf50Q8WW18 174 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PPP2R3CQ969Q6 453 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 RNF25Q96BH1 459 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MAGEB18Q96M61 343 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ERP44Q9BS26 406 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 AP1M1Q9BXS5 423 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 CCSER1Q9C0I3 900 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 NDUFA13Q9P0J0 144 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MTRF1LQ9UGC7 380 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 TBC1D30Q9Y2I9 924 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 USH1CQ9Y6N9 552 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MYH3P11055 1940 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ANKRD36CQ5JPF3 1778 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PCDH11XQ9BZA7 1347 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 A0A0A6YYK5 440 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MAPK13O15264 365 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ATP9BO43861 1147 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ASLP04424 464 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 VIL1P09327 827 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 EIF4BP23588 611 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MARK3P27448 753 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PSMD7P51665 324 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PHEXP78562 749 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PKN1Q16512 942 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 NAALADL2Q58DX5 795 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 SNX30Q5VWJ9 437 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 CENPPQ6IPU0 288 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 KLC3Q6P597 504 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 LRRC74BQ6ZQY2 392 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 METTL13Q8N6R0 699 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 SLC17A8Q8NDX2 589 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 CATSPER2Q96P56 530 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 TBC1D10AQ9BXI6 508 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 MYLK2Q9H1R3 596 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 RANBP17Q9H2T7 1088 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PCDH18Q9HCL0 1135 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF212Q9UDV6 495 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 LNPEPQ9UIQ6 1025 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
SMARCE1-207ENST00000469334 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 PRAMEF22A3QJZ6 481 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 WNT7AO00755 349 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MAP3K7O43318 606 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 PTPN4P29074 926 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MAGEA10P43363 369 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ZAP70P43403 619 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms