RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 TRAF3IP3Q9Y228 551 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 EMSYQ7Z589 1322 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 SIP14410 1827 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.24
CRAMP1-206ENST00000468839 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 NKRFO15226 690 aaKnown RBP eCLIP16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 PPP1R37O75864 691 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 PRPF6O94906 941 aaKnown RBP16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 GCNT3O95395 438 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 GH1P01241 217 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 PLS3P13797 630 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 RTP1P59025 263 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 ARHGAP1Q07960 439 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 ACVR2BQ13705 512 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 TARBP2Q15633 366 aaKnown RBP16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 NFIL3Q16649 462 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 ODR4Q5SWX8 454 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 VSTM4Q8IW00 320 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 SLC17A8Q8NDX2 589 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 MCPH1Q8NEM0 835 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 KIFAP3Q92845 792 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 COPS5Q92905 334 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 SPATA33Q96N06 139 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 SEPT9Q9UHD8 586 aaPredicted RBP16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
CRAMP1-206ENST00000468839 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 IGHA2P01877 340 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 SLC26A2P50443 739 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 OLFML2BQ68BL8 750 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 CCDC186Q7Z3E2 898 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 SOCS4Q8WXH5 440 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 NTPCRQ9BSD7 190 aaKnown RBP16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 TYW1Q9NV66 732 aaKnown RBP16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 KCNG1Q9UIX4 513 aa16.56■□□□□ 0.24
CRAMP1-206ENST00000468839 CALUO43852 315 aaPredicted RBP16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 PBX1P40424 430 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 RGS2P41220 211 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 GSDMDP57764 484 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 MTERF2Q49AM1 385 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 DUSP28Q4G0W2 176 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 CAPNS2Q96L46 248 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 CNOT6LQ96LI5 555 aaKnown RBP16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 SH2D3AQ9BRG2 576 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 SMARCAD1Q9H4L7 1026 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 DHX33Q9H6R0 707 aaKnown RBP16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 ATP6V0A4Q9HBG4 840 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 XPNPEP1Q9NQW7 623 aa16.55■□□□□ 0.24
CRAMP1-206ENST00000468839 N4BP3O15049 544 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 TEX33O43247 280 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 GNA14O95837 355 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 RFC5P40937 340 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 ADCYAP1R1P41586 468 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 APLP1P51693 650 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 GTF2BQ00403 316 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 FAM102BQ5T8I3 360 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 TRMT1LQ7Z2T5 733 aaKnown RBP16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 KCNN1Q92952 543 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 HVCN1Q96D96 273 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 VPS16Q9H269 839 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
CRAMP1-206ENST00000468839 TNPO2O14787 897 aaKnown RBP16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 CETN3O15182 167 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 TGFB1I1O43294 461 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 PTGS1P23219 599 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 ZC2HC1CQ53FD0 456 aaPredicted RBP16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 TMEM174Q8WUU8 243 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 GLG1Q92896 1179 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 APBA2Q99767 749 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 TUBGCP2Q9BSJ2 902 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 CFHR5Q9BXR6 569 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 TMEM206Q9H813 350 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 GPRC5CQ9NQ84 441 aa16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 CGNQ9P2M7 1197 aaKnown RBP16.53■□□□□ 0.24
CRAMP1-206ENST00000468839 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms