RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PIK3AP1Q6ZUJ8 805 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 DBF4BQ8NFT6 615 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 GJA10Q969M2 543 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 TIFAQ96CG3 184 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 SLC9A7Q96T83 725 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 DISC1Q9NRI5 854 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 DDX25Q9UHL0 483 aaKnown RBP12.59□□□□□ -0.39
COL4A6-205ENST00000468338 PCDHA11Q9Y5I1 949 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 SIP14410 1827 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 BTBD18B2RXH4 712 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 TBX3O15119 743 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 ZNF862O60290 1169 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 EFCAB14O75071 495 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
COL4A6-205ENST00000468338 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
COL4A6-205ENST00000468338 RAB30Q15771 203 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 LETM2Q2VYF4 491 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 ZNF484Q5JVG2 852 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 DNAJB3Q8WWF6 145 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 HAS1Q92839 578 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 FAM20AQ96MK3 541 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 NAP1L4Q99733 375 aaKnown RBP12.58□□□□□ -0.4
COL4A6-205ENST00000468338 TEKT3Q9BXF9 490 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 ZNF576Q9H609 170 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 GABBR1Q9UBS5 961 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 STXBP5LQ9Y2K9 1186 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
COL4A6-205ENST00000468338 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
COL4A6-205ENST00000468338 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 RBAK-RBAKDNI3L0D1 243 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 STBD1O95210 358 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 CTSHP09668 335 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 KLRC1P26715 233 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 JAK3P52333 1124 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 IGBP1P78318 339 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 PPP2R5CQ13362 524 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 IKBKEQ14164 716 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 MTHFD1LQ6UB35 978 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 RSPH3Q86UC2 560 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 DIS3L2Q8IYB7 885 aaKnown RBP12.57□□□□□ -0.4
COL4A6-205ENST00000468338 NME8Q8N427 588 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 FBXO18Q8NFZ0 1043 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 ZBTB10Q96DT7 871 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
COL4A6-205ENST00000468338 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 KIAA1468Q9P260 1216 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 MSRAQ9UJ68 235 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 VAV3Q9UKW4 847 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 SQORQ9Y6N5 450 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
COL4A6-205ENST00000468338 LOXHD1Q8IVV2 1947 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 TTC3P53804 2025 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 HOXA2O43364 376 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 ST18O60284 1047 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
COL4A6-205ENST00000468338 C22orf31O95567 290 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 RABGGTBP53611 331 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 MRPS6P82932 125 aaKnown RBP12.56□□□□□ -0.4
COL4A6-205ENST00000468338 LPIN1Q14693 890 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 UGCGQ16739 394 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 FBXO47Q5MNV8 452 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 KIAA0319LQ8IZA0 1049 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 SEPT8Q92599 483 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 APBB2Q92870 758 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 FAM167AQ96KS9 214 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
COL4A6-205ENST00000468338 CDX2Q99626 313 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-205ENST00000468338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 EML1O00423 815 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 WNT7AO00755 349 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 CCNT1O60563 726 aaKnown RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 GJB5O95377 273 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 MYOGP15173 224 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 DEFB103AP81534 67 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 TRIM29Q14134 588 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 GRIN2CQ14957 1233 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 TARBP2Q15633 366 aaKnown RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 IER5Q5VY09 327 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 MIER3Q7Z3K6 550 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 LINC01465Q8N7H1 131 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 BACH2Q9BYV9 841 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 FAM49AQ9H0Q0 323 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 NKX2-4Q9H2Z4 354 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 AGO3Q9H9G7 860 aaKnown RBP12.55□□□□□ -0.4
COL4A6-205ENST00000468338 NRBP2Q9NSY0 501 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms