RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MICALL1Q8N3F8 863 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 C17orf80Q9BSJ5 609 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 TMX1Q9H3N1 280 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 SH2B1Q9NRF2 756 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 NOC2LQ9Y3T9 749 aaKnown RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 COL4A4P53420 1690 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 DLL1O00548 723 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 MARCH6O60337 910 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 RPS6KA5O75582 802 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 PSMC5P62195 406 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 CRIPAKQ8N1N5 446 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 ZNF710Q8N1W2 664 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 LRRC71Q8N4P6 559 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 GDPD5Q8WTR4 605 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 TMEM40Q8WWA1 233 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 SAMD11Q96NU1 681 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 MAP7D2Q96T17 732 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 ERVK-5Q9HDB9 667 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 PRDM6Q9NQX0 595 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 LMCD1Q9NZU5 365 aa19.22■□□□□ 0.67
SSBP1-207ENST00000468267 MYO7AQ13402 2215 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 DDX11L8A8MPP1 907 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 BAG4O95429 457 aaKnown RBP19.21■□□□□ 0.67
SSBP1-207ENST00000468267 TBC1D8BQ0IIM8 1120 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 NFX1Q12986 1120 aaKnown RBP19.21■□□□□ 0.67
SSBP1-207ENST00000468267 ODR4Q5SWX8 454 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 SLFN12Q8IYM2 578 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 FBXO22Q8NEZ5 403 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 CEP89Q96ST8 783 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 PPP1R16BQ96T49 567 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 OSMRQ99650 979 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 RC3H2Q9HBD1 1191 aaKnown RBP19.21■□□□□ 0.67
SSBP1-207ENST00000468267 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
SSBP1-207ENST00000468267 ST3GAL5Q9UNP4 418 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 AKT3Q9Y243 479 aa19.21■□□□□ 0.67
SSBP1-207ENST00000468267 RALGAPA2Q2PPJ7 1873 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 TMEM150BA6NC51 233 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 GPR182O15218 404 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 QARSP47897 775 aaKnown RBP19.2■□□□□ 0.66
SSBP1-207ENST00000468267 NLRP11P59045 1033 aaKnown RBP19.2■□□□□ 0.66
SSBP1-207ENST00000468267 MTERF2Q49AM1 385 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 EPC2Q52LR7 807 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 ZNF689Q96CS4 500 aaPredicted RBP19.2■□□□□ 0.66
SSBP1-207ENST00000468267 ADAMTS10Q9H324 1103 aa19.2■□□□□ 0.66
SSBP1-207ENST00000468267 DKC1O60832 514 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSBP1-207ENST00000468267 DGKIO75912 1065 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 P4HBP07237 508 aaKnown RBP19.19■□□□□ 0.66
SSBP1-207ENST00000468267 HMGN5P82970 282 aaKnown RBP19.19■□□□□ 0.66
SSBP1-207ENST00000468267 GUCY1B3Q02153 619 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 SPIRE1Q08AE8 756 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 RABEP1Q15276 862 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 EPHA7Q15375 998 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSBP1-207ENST00000468267 ANO5Q75V66 913 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 FAM228AQ86W67 206 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 NPAS4Q8IUM7 802 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 TMEM192Q8IY95 271 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 FIBCD1Q8N539 461 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 C8orf76Q96K31 380 aa19.19■□□□□ 0.66
SSBP1-207ENST00000468267 BDP1A6H8Y1 2624 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 IGKV6-21A0A0C4DH24 114 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 MGEA5O60502 916 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 STAG3L1P0CL83 205 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 ADAM2Q99965 735 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 SH2D3AQ9BRG2 576 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 RGS18Q9NS28 235 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 THEGQ9P2T0 379 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 ADGRA3Q8IWK6 1321 aa19.18■□□□□ 0.66
SSBP1-207ENST00000468267 DENND3A2RUS2 1198 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 WNT7AO00755 349 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 EIF4BP23588 611 aaKnown RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 SARSP49591 514 aaKnown RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 DNM2P50570 870 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 GPC3P51654 580 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 CDC42EP1Q00587 391 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 CALCRLQ16602 461 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 NCAPH2Q6IBW4 605 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 FBXO18Q8NFZ0 1043 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 CLP1Q92989 425 aaKnown RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 COL25A1Q9BXS0 654 aaPredicted RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 C1orf112Q9NSG2 853 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 WRAP73Q9P2S5 460 aaPredicted RBP19.17■□□□□ 0.66
SSBP1-207ENST00000468267 PCDHA12Q9UN75 941 aa19.17■□□□□ 0.66
SSBP1-207ENST00000468267 MUC3AQ02505 3323 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 H3BNC9 293 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 NEMFO60524 1076 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 LINC00271P0C7V0 271 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 DRP2Q13474 957 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
SSBP1-207ENST00000468267 DSC3Q14574 896 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 PLA2G4FQ68DD2 849 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 SLC24A5Q71RS6 500 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 C4orf19Q8IY42 314 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 FAM184AQ8NB25 1140 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 IL27Q8NEV9 243 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms