RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 HAS1Q92839 578 aa16.4■□□□□ 0.22
COMMD3-206ENST00000468179 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
COMMD3-206ENST00000468179 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
COMMD3-206ENST00000468179 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
COMMD3-206ENST00000468179 VAV3Q9UKW4 847 aa16.4■□□□□ 0.22
COMMD3-206ENST00000468179 PCDHA12Q9UN75 941 aa16.4■□□□□ 0.22
COMMD3-206ENST00000468179 NEMFO60524 1076 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
COMMD3-206ENST00000468179 TARBP2Q15633 366 aaKnown RBP16.39■□□□□ 0.21
COMMD3-206ENST00000468179 KIZQ2M2Z5 673 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 BANK1Q8NDB2 785 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 RWDD3Q9Y3V2 267 aa16.39■□□□□ 0.21
COMMD3-206ENST00000468179 DENND3A2RUS2 1198 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 GPR32O75388 356 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 VTNP04004 478 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 CLCN3P51790 818 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 MTERF2Q49AM1 385 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 NCAPH2Q6IBW4 605 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 C4orf19Q8IY42 314 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 FIBCD1Q8N539 461 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 FBXO18Q8NFZ0 1043 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 ERVK-5Q9HDB9 667 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 LRFN2Q9ULH4 789 aa16.38■□□□□ 0.21
COMMD3-206ENST00000468179 NOC2LQ9Y3T9 749 aaKnown RBP16.38■□□□□ 0.21
COMMD3-206ENST00000468179 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 EML1O00423 815 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 ARHGEF15O94989 841 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 NLRP11P59045 1033 aaKnown RBP16.37■□□□□ 0.21
COMMD3-206ENST00000468179 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 LRRC71Q8N4P6 559 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 LINC01465Q8N7H1 131 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 SLC7A3Q8WY07 619 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 OSMRQ99650 979 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 INO80BQ9C086 356 aaPredicted RBP16.37■□□□□ 0.21
COMMD3-206ENST00000468179 CYP26B1Q9NR63 512 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
COMMD3-206ENST00000468179 ST3GAL5Q9UNP4 418 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 MTCH2Q9Y6C9 303 aa16.37■□□□□ 0.21
COMMD3-206ENST00000468179 RFXAPO00287 272 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 STBD1O95210 358 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 EIF4BP23588 611 aaKnown RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 RFC5P40937 340 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 TRAPPC10P48553 1259 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 GRB10Q13322 594 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 CCDC85BQ15834 202 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 PTPROQ16827 1216 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 SLC24A5Q71RS6 500 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 MICALL1Q8N3F8 863 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 NLRP7Q8WX94 980 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 GBF1Q92538 1859 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 CEP170P1Q96L14 293 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 GCOM2Q9BZD3 368 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 ADAMTS10Q9H324 1103 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-206ENST00000468179 CDHR5Q9HBB8 845 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 RGS18Q9NS28 235 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 MTUS1Q9ULD2 1270 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
COMMD3-206ENST00000468179 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
COMMD3-206ENST00000468179 IGKV6-21A0A0C4DH24 114 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 EPOPA6NHQ4 379 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 GAS2O43903 313 aaKnown RBP16.35■□□□□ 0.21
COMMD3-206ENST00000468179 DGKIO75912 1065 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 RB1P06400 928 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 ATP2B1P20020 1258 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 YWHABP31946 246 aaKnown RBP16.35■□□□□ 0.21
COMMD3-206ENST00000468179 MCM7P33993 719 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 TXKP42681 527 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 GPC3P51654 580 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 BTG3Q14201 252 aaPredicted RBP16.35■□□□□ 0.21
COMMD3-206ENST00000468179 ANO5Q75V66 913 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
COMMD3-206ENST00000468179 NOSTRINQ8IVI9 506 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 TMEM40Q8WWA1 233 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 PPP1R16BQ96T49 567 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 ADAM2Q99965 735 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 LXNQ9BS40 222 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 TMX1Q9H3N1 280 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 MICAL3Q7RTP6 2002 aa16.35■□□□□ 0.21
COMMD3-206ENST00000468179 DARSP14868 501 aaKnown RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 POLGP54098 1239 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 SPIRE1Q08AE8 756 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 ZNF410Q86VK4 478 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms