RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 CEP135Q66GS9 1140 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 USP37Q86T82 979 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 NELFCDQ8IXH7 590 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 PPP1R13BQ96KQ4 1090 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 FIZ1Q96SL8 496 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 JPH2Q9BR39 696 aaPredicted RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 TUBB2BQ9BVA1 445 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 TTYH3Q9C0H2 523 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 NRBP2Q9NSY0 501 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 WRAP73Q9P2S5 460 aaPredicted RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 FBXL5Q9UKA1 691 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 IGKV6D-21A0A0A0MT36 114 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 TTC26A0AVF1 554 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 RSPH10B2B2RC85 870 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 P4HA2O15460 535 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 N4BP1O75113 896 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 PRPF6O94906 941 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 RSPH10BP0C881 870 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 MYBP10242 640 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 RFC5P40937 340 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSH5-213ENST00000468136 NCKAP1LP55160 1127 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 RAD51AP2Q09MP3 1159 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 MAPK7Q13164 816 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 SYCP3Q8IZU3 236 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 AFAP1L1Q8TED9 768 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 IFT74Q96LB3 600 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 PARK7Q99497 189 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 PAGR1Q9BTK6 254 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 ATP6V0A4Q9HBG4 840 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 LUC7LQ9NQ29 371 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 ZNF302Q9NR11 478 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 DMAC2Q9NW81 257 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 CEP72Q9P209 647 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 PPP2R2CQ9Y2T4 447 aa11.19□□□□□ -0.62
MSH5-213ENST00000468136 MAFBQ9Y5Q3 323 aaPredicted RBP11.19□□□□□ -0.62
MSH5-213ENST00000468136 ASTN1O14525 1302 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 K7ENM7 598 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 BACH1O14867 736 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 PMM2O15305 246 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 USO1O60763 962 aaKnown RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 COBLO75128 1261 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 RFX1P22670 979 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 CASP5P51878 434 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 CETN1Q12798 172 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 SWSAP1Q6NVH7 229 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 DAW1Q8N136 415 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 CPLX3Q8WVH0 158 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 SEPT1Q8WYJ6 367 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 CEP170P1Q96L14 293 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 C16orf45Q96MC5 204 aaPredicted RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 SLC5A4Q9NY91 659 aa11.18□□□□□ -0.62
MSH5-213ENST00000468136 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
MSH5-213ENST00000468136 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 TGFB1I1O43294 461 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 OATP04181 439 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 HOXC6P09630 235 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 KRT13P13646 458 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 NMT1P30419 496 aaKnown RBP11.17□□□□□ -0.62
MSH5-213ENST00000468136 GTF2F1P35269 517 aaKnown RBP eCLIP11.17□□□□□ -0.627e-15■■■■□ 25.6
MSH5-213ENST00000468136 HOXD13P35453 343 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 CNTN2Q02246 1040 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 CCL15Q16663 113 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 ANO5Q75V66 913 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 PLPPR4Q7Z2D5 763 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 HAUS6Q7Z4H7 955 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms