RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	RESP18	Q5W5W9	173 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	MIS18BP1	Q6P0N0	1132 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	C4orf32	Q8N8J7	132 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	DNAJB3	Q8WWF6	145 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	LENG9	Q96B70	501 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM20A	Q96MK3	541 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	TIGD1	Q96MW7	591 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	IFIH1	Q9BYX4	1025 aa	Known RBP	13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	CERS4	Q9HA82	394 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	PCDHA2	Q9Y5H9	948 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	PTPRS	Q13332	1948 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	POTEB3	A0JP26	581 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	RFXAP	O00287	272 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	HTRA4	P83105	476 aa	Predicted RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	LPIN1	Q14693	890 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	CALCRL	Q16602	461 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	PRR16	Q569H4	304 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	CCDC183	Q5T5S1	534 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	POTEB	Q6S5H4	581 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	SPRED2	Q7Z698	418 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	ATP8B4	Q8TF62	1192 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	PPM1E	Q8WY54	764 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	ARNTL2	Q8WYA1	636 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	TOP1MT	Q969P6	601 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	ZBTB10	Q96DT7	871 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	ZNF302	Q9NR11	478 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	DDX25	Q9UHL0	483 aa	Known RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	HOOK1	Q9UJC3	728 aa	Known RBP	13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	INSL6	Q9Y581	213 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	MTCH2	Q9Y6C9	303 aa		13.49	□□□□□ -0.25
CTNS-205	ENST00000467663	SMIM35	A0A1B0GVV1	85 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	LINC01553	A4QN01	128 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	BACH1	O14867	736 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	HBP1	O60381	514 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	KIN	O60870	393 aa	Known RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	GHR	P10912	638 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	ATP4A	P20648	1035 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	FXR2	P51116	673 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	ERVK-21	P61565	698 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	MRPS6	P82932	125 aa	Known RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	KRT76	Q01546	638 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	FBXO47	Q5MNV8	452 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	SWSAP1	Q6NVH7	229 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	KANK3	Q6NY19	840 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM117B	Q6P1L5	589 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	PDXDC2P	Q6P474	469 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	MTHFD1L	Q6UB35	978 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	MYOCD	Q8IZQ8	938 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	NME8	Q8N427	588 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	KCTD17	Q8N5Z5	321 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	FSIP1	Q8NA03	581 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	SP7	Q8TDD2	431 aa	Predicted RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	TRAPPC12	Q8WVT3	735 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	MTMR9	Q96QG7	549 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	UIMC1	Q96RL1	719 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	TGS1	Q96RS0	853 aa	Known RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	HPSE	Q9Y251	543 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	CDY2A	Q9Y6F7	541 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	SQOR	Q9Y6N5	450 aa		13.48	□□□□□ -0.25
CTNS-205	ENST00000467663	CHD7	Q9P2D1	2997 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	COL1A2	P08123	1366 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	MYO9B	Q13459	2157 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	MSH4	O15457	936 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	MARCH6	O60337	910 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	LPXN	O60711	386 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	PSAP	P07602	524 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	KLRC1	P26715	233 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	SYK	P43405	635 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	GRB10	Q13322	594 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	CCDC85B	Q15834	202 aa	Predicted RBP	13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	ZNF484	Q5JVG2	852 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	IER5	Q5VY09	327 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	CAVIN1	Q6NZI2	390 aa	Known RBP	13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	TSHZ1	Q6ZSZ6	1077 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	ENGASE	Q8NFI3	743 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	RIT2	Q99578	217 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	CCSER1	Q9C0I3	900 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	PRDM6	Q9NQX0	595 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	PCDHA10	Q9Y5I2	948 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	KAT6A	Q92794	2004 aa		13.47	□□□□□ -0.25
CTNS-205	ENST00000467663	KDM3A	Q9Y4C1	1321 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	MICAL3	Q7RTP6	2002 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	VWA3A	A6NCI4	1184 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	ZBTB42	B2RXF5	422 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	GTPBP6	O43824	516 aa	Predicted RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	SHC4	Q6S5L8	630 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	BBX	Q8WY36	941 aa	Predicted RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	SLC5A5	Q92911	643 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	CELF4	Q9BZC1	486 aa	Known RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	CSRNP2	Q9H175	543 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	NUP62CL	Q9H1M0	184 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms