RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	VWA3B	Q502W6	1294 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	XKR3	Q5GH77	459 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	FKBP15	Q5T1M5	1219 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	FAM102B	Q5T8I3	360 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	FAM160B1	Q5W0V3	765 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	CEP135	Q66GS9	1140 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF720	Q7Z2F6	126 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	TC2N	Q8N9U0	490 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	MLXIP	Q9HAP2	919 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	GPRC5C	Q9NQ84	441 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	CYP26B1	Q9NR63	512 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	PCDHB13	Q9Y5F0	798 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	NKRF	O15226	690 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	MFAP3L	O75121	409 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	DGAT1	O75907	488 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	NR3C1	P04150	777 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	GYPC	P04921	128 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	TCF7	P36402	384 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	ADK	P55263	362 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	MARS	P56192	900 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	RBL2	Q08999	1139 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	KCNA1	Q09470	495 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	ADAM9	Q13443	819 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	TTLL4	Q14679	1199 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	TAF1C	Q15572	869 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	NFIL3	Q16649	462 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	MTERF2	Q49AM1	385 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	CELF3	Q5SZQ8	465 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	PLEKHH3	Q7Z736	793 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	KSR1	Q8IVT5	923 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	MCPH1	Q8NEM0	835 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	AFAP1L1	Q8TED9	768 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	SCFD2	Q8WU76	684 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	SEPT1	Q8WYJ6	367 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	STRA6	Q9BX79	667 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	ATP6V0A4	Q9HBG4	840 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	VTA1	Q9NP79	307 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	CPA4	Q9UI42	421 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	TLL2	Q9Y6L7	1015 aa		13.54	□□□□□ -0.24
HDLBP-231	ENST00000467435	NOP56	O00567	594 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	SLC16A3	O15427	465 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	TGFB1I1	O43294	461 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	TXN	P10599	105 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	ATP4A	P20648	1035 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	RPL13	P26373	211 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	CASP14	P31944	242 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	NCKAP1L	P55160	1127 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	PEX3	P56589	373 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	TBC1D8B	Q0IIM8	1120 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	CCDC62	Q6P9F0	684 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	HS2ST1	Q7LGA3	356 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	CNGA4	Q8IV77	575 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	SLC17A8	Q8NDX2	589 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	CPLX3	Q8WVH0	158 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	KIFAP3	Q92845	792 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	PCYT2	Q99447	389 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	GPR20	Q99678	358 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	NDST4	Q9H3R1	872 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	SPTLC3	Q9NUV7	552 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	SRCAP	Q6ZRS2	3230 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZSWIM8	A7E2V4	1837 aa		13.53	□□□□□ -0.24
HDLBP-231	ENST00000467435	SLC15A5	A6NIM6	579 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	CLIC2	O15247	247 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	EPB41	P11171	864 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	FXR1	P51114	621 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	STAT5B	P51692	787 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	POLG	P54098	1239 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	DMP1	Q13316	513 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	EMC2	Q15006	297 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	SYCP1	Q15431	976 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	DPP9	Q86TI2	863 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	IFNL1	Q8IU54	200 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	TMEM139	Q8IV31	216 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	TRIM59	Q8IWR1	403 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	DHX37	Q8IY37	1157 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	SYCP3	Q8IZU3	236 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	GOLGA5	Q8TBA6	731 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	COPS5	Q92905	334 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	HVCN1	Q96D96	273 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	CCDC51	Q96ER9	411 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	FAM167A	Q96KS9	214 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	ACCS	Q96QU6	501 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	PANX2	Q96RD6	677 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	ERGIC2	Q96RQ1	377 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	BAG1	Q99933	345 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	GBP3	Q9H0R5	595 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	TMX1	Q9H3N1	280 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	ST6GALNAC4	Q9H4F1	302 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	AZI2	Q9H6S1	392 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	TMEM206	Q9H813	350 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	XPNPEP1	Q9NQW7	623 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	PDGFC	Q9NRA1	345 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms