RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 C17orf102A2RUQ5 167 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 ZBTB42B2RXF5 422 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 ARVCFO00192 962 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 MAGEB2O15479 319 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 ACTN4O43707 911 aaKnown RBP16.4■□□□□ 0.22
DDX56-208ENST00000467318 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
DDX56-208ENST00000467318 RFC5P40937 340 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 NECAB2Q7Z6G3 386 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 DHX33Q9H6R0 707 aaKnown RBP16.4■□□□□ 0.22
DDX56-208ENST00000467318 BMP2KQ9NSY1 1161 aaPredicted RBP16.4■□□□□ 0.22
DDX56-208ENST00000467318 SETD4Q9NVD3 440 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 SERTAD1Q9UHV2 236 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 GAS2O43903 313 aaKnown RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
DDX56-208ENST00000467318 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 ADAM17P78536 824 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 MCM6Q14566 821 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 C1orf53Q5VUE5 145 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 PADI6Q6TGC4 694 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 ELOA2Q8IYF1 753 aaPredicted RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 NAP1L5Q96NT1 182 aaPredicted RBP16.39■□□□□ 0.21
DDX56-208ENST00000467318 SH2D3AQ9BRG2 576 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
DDX56-208ENST00000467318 MBLAC1A4D2B0 266 aaPredicted RBP16.38■□□□□ 0.21
DDX56-208ENST00000467318 MAFO75444 373 aaPredicted RBP16.38■□□□□ 0.21
DDX56-208ENST00000467318 MYL1P05976 194 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 EN2P19622 333 aaPredicted RBP16.38■□□□□ 0.21
DDX56-208ENST00000467318 IGBP1P78318 339 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
DDX56-208ENST00000467318 RINT1Q6NUQ1 792 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 C1orf186Q6ZWK4 172 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 C11orf49Q9H6J7 331 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
DDX56-208ENST00000467318 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
DDX56-208ENST00000467318 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 ZNF500O60304 480 aaPredicted RBP16.37■□□□□ 0.21
DDX56-208ENST00000467318 CYP11B2P19099 503 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 KLRC1P26715 233 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 CDK7P50613 346 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 MTHFD1LQ6UB35 978 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 SLC39A5Q6ZMH5 540 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
DDX56-208ENST00000467318 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 PDLIM7Q9NR12 457 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
DDX56-208ENST00000467318 C22orf31O95567 290 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 RPLP2P05387 115 aaKnown RBP16.37■□□□□ 0.21
DDX56-208ENST00000467318 GUCY2CP25092 1073 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 TMOD1P28289 359 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 DNM2P50570 870 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
DDX56-208ENST00000467318 GPBP1Q86WP2 473 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 MTRQ99707 1265 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 ZKSCAN5Q9Y2L8 839 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
DDX56-208ENST00000467318 TERF1P54274 439 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 SOX10P56693 466 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 EMC2Q15006 297 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 SNX17Q15036 470 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 PTGISQ16647 500 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 ARSHQ5FYA8 562 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 EFCAB12Q6NXP0 572 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 UBE2Q1Q7Z7E8 422 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 DDX12PQ92771 950 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 RUSC1Q9BVN2 902 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 ODF2LQ9ULJ1 636 aa16.36■□□□□ 0.21
DDX56-208ENST00000467318 SMIM35A0A1B0GVV1 85 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 TREHO43280 583 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 OFD1O75665 1012 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
DDX56-208ENST00000467318 AFMP43652 599 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 HIC1Q14526 733 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 METTL13Q8N6R0 699 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 TOX2Q96NM4 488 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 TRIM9Q9C026 710 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms