RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 GJD2Q9UKL4 321 aa16.89■□□□□ 0.29
SNED1-208ENST00000466618 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
SNED1-208ENST00000466618 SOWAHBA6NEL2 793 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 LRRC10BA6NIK2 292 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 N4BP3O15049 544 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 ZEB2O60315 1214 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 COBLO75128 1261 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
SNED1-208ENST00000466618 ZNF792Q3KQV3 632 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 SRPRBQ9Y5M8 271 aaKnown RBP16.88■□□□□ 0.29
SNED1-208ENST00000466618 A6NNZ2 444 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 RDXP35241 583 aaKnown RBP16.88■□□□□ 0.29
SNED1-208ENST00000466618 PSMC4P43686 418 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 COPB1P53618 953 aaKnown RBP16.88■□□□□ 0.29
SNED1-208ENST00000466618 SMTNP53814 917 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 ACTN3Q08043 901 aaPredicted RBP16.88■□□□□ 0.29
SNED1-208ENST00000466618 INF2Q27J81 1249 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 TUBB8Q3ZCM7 444 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 CCDC122Q5T0U0 273 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 NAA35Q5VZE5 725 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 HDAC7Q8WUI4 952 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 CSRNP2Q9H175 543 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 VPS16Q9H269 839 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 PXMP2Q9NR77 195 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 CTNND2Q9UQB3 1225 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
SNED1-208ENST00000466618 AFMP43652 599 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 FCGRTP55899 365 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 ZNF662Q6ZS27 426 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 MMGT1Q8N4V1 131 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 NSUN6Q8TEA1 469 aaKnown RBP16.87■□□□□ 0.29
SNED1-208ENST00000466618 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
SNED1-208ENST00000466618 WNT7AO00755 349 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
SNED1-208ENST00000466618 CYP3A4P08684 503 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 HOXC6P09630 235 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 ARHGAP4P98171 946 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
SNED1-208ENST00000466618 PAGE5Q96GU1 130 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 PDCD2LQ9BRP1 358 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 TAB2Q9NYJ8 693 aa16.87■□□□□ 0.29
SNED1-208ENST00000466618 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
SNED1-208ENST00000466618 RBBP6Q7Z6E9 1792 aaKnown RBP16.86■□□□□ 0.29
SNED1-208ENST00000466618 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
SNED1-208ENST00000466618 EDNRBP24530 442 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 LSP1P33241 339 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 ATP1A2P50993 1020 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 USP11P51784 963 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 PGM5Q15124 567 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 PPP2R5AQ15172 486 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 CCDC40Q4G0X9 1142 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 CCDC13Q8IYE1 715 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 EPN3Q9H201 632 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 ODF2LQ9ULJ1 636 aa16.86■□□□□ 0.29
SNED1-208ENST00000466618 RCCD1A6NED2 376 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 FKTNO75072 461 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ALDH5A1P51649 535 aaPredicted RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 MAP2K5Q13163 448 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ALS2CLQ60I27 953 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 WDR59Q6PJI9 974 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 MICALCLQ6ZW33 695 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 IL31RAQ8NI17 732 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 MORC4Q8TE76 937 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ZNF473Q8WTR7 871 aaKnown RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 RUBCNQ92622 972 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 IWS1Q96ST2 819 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 LRRC1Q9BTT6 524 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 EHMT1Q9H9B1 1298 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 TTC26A0AVF1 554 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 EIF2AK2P19525 551 aaKnown RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 CIITAP33076 1130 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 PCNX4Q63HM2 1172 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 KDM7AQ6ZMT4 941 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 RNPC3Q96LT9 517 aaKnown RBP16.85■□□□□ 0.29
SNED1-208ENST00000466618 NUDT12Q9BQG2 462 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 LACRTQ9GZZ8 138 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 SLC40A1Q9NP59 571 aa16.85■□□□□ 0.29
SNED1-208ENST00000466618 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms