RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MXRA8Q9BRK3 442 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 MYL10Q9BUA6 226 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 LIMD1Q9UGP4 676 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.23
CXCR4-203ENST00000466288 IGKV6D-21A0A0A0MT36 114 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 SPDYE3A6NKU9 549 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 E7EWF7 191 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 CLASP2O75122 1294 aaKnown RBP16.51■□□□□ 0.23
CXCR4-203ENST00000466288 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 WEE2P0C1S8 567 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 ARP10275 920 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 PPM1AP35813 382 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 MTHFRP42898 656 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 SLC26A2P50443 739 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
CXCR4-203ENST00000466288 KRT17Q04695 432 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
CXCR4-203ENST00000466288 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
CXCR4-203ENST00000466288 ZNF558Q96NG5 402 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 SDF4Q9BRK5 362 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 MFSD1Q9H3U5 465 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 ZNF292O60281 2723 aa16.51■□□□□ 0.23
CXCR4-203ENST00000466288 HBP1O60381 514 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 KIF5BP33176 963 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
CXCR4-203ENST00000466288 NUCB1Q02818 461 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
CXCR4-203ENST00000466288 RALYLQ86SE5 291 aaKnown RBP16.5■□□□□ 0.23
CXCR4-203ENST00000466288 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 TDRD5Q8NAT2 981 aaKnown RBP16.5■□□□□ 0.23
CXCR4-203ENST00000466288 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 OSMRQ99650 979 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
CXCR4-203ENST00000466288 LOXHD1Q8IVV2 1947 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 PI15O43692 258 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 GPR32O75388 356 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 DDAH1O94760 285 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 PTH1RQ03431 593 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 KIZQ2M2Z5 673 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 KIAA1841Q6NSI8 718 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
CXCR4-203ENST00000466288 CMTR1Q8N1G2 835 aaKnown RBP16.49■□□□□ 0.23
CXCR4-203ENST00000466288 LRRC43Q8N309 656 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 C12orf76Q8N812 135 aaPredicted RBP16.49■□□□□ 0.23
CXCR4-203ENST00000466288 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
CXCR4-203ENST00000466288 USTQ9Y2C2 406 aa16.49■□□□□ 0.23
CXCR4-203ENST00000466288 HOXA2O43364 376 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 CCNE2O96020 404 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 NPR3P17342 541 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 AOC1P19801 751 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
CXCR4-203ENST00000466288 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 ABHD15Q6UXT9 468 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 FLCNQ8NFG4 579 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 COL1A2P08123 1366 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 MYO10Q9HD67 2058 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 hCG_1642624A0A1W2PR95 340 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 GNAQP50148 359 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 ANGPT1Q15389 498 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
CXCR4-203ENST00000466288 C22orf31O95567 290 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 EOMESO95936 686 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 VTNP04004 478 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 ATP4AP20648 1035 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 CLLU1OSQ5K130 101 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 ATAT1Q5SQI0 421 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
CXCR4-203ENST00000466288 ABI1Q8IZP0 508 aa16.47■□□□□ 0.23
CXCR4-203ENST00000466288 DBR1Q9UK59 544 aaKnown RBP16.47■□□□□ 0.23
CXCR4-203ENST00000466288 MEIS1O00470 390 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 BACH1O14867 736 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 CXCL14O95715 111 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 KCNA4P22459 653 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 RMDN1Q96DB5 314 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 CYP26B1Q9NR63 512 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 DZANK1Q9NVP4 752 aa16.46■□□□□ 0.23
CXCR4-203ENST00000466288 MED19A0JLT2 244 aaPredicted RBP16.45■□□□□ 0.22
CXCR4-203ENST00000466288 IGHDP01880 384 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 EPCAMP16422 314 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 RXRAP19793 462 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
CXCR4-203ENST00000466288 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 ZFHX4Q86UP3 3567 aa16.45■□□□□ 0.22
CXCR4-203ENST00000466288 NT5C1B-RDH14C9J2C7 533 aa16.44■□□□□ 0.22
CXCR4-203ENST00000466288 DDX39AO00148 427 aaKnown RBP16.44■□□□□ 0.22
CXCR4-203ENST00000466288 ZSCAN20P17040 1043 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms