RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NKX2-4Q9H2Z4 354 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 ZSWIM4Q9H7M6 989 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 CYP26B1Q9NR63 512 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 MSRAQ9UJ68 235 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 AKT3Q9Y243 479 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 GINS2Q9Y248 185 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 PCDHA11Q9Y5I1 949 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 SQORQ9Y6N5 450 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 PRUNE2Q8WUY3 3088 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 DDX11L8A8MPP1 907 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 MYOGP15173 224 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 TMOD1P28289 359 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 CD52P31358 61 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 DRP2Q13474 957 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 KIZQ2M2Z5 673 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 TMEM266Q2M3C6 531 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 RILPL1Q5EBL4 403 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 PPP2R2DQ66LE6 453 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL5A1-206ENST00000465877 TMEM40Q8WWA1 233 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 GUCD1Q96NT3 240 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 OSMRQ99650 979 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.44□□□□□ -0.1
COL5A1-206ENST00000465877 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 UNC80Q8N2C7 3258 aa14.44□□□□□ -0.1
COL5A1-206ENST00000465877 IGKV6-21A0A0C4DH24 114 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-206ENST00000465877 TLL1O43897 1013 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 GPR32O75388 356 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 MAFO75444 373 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-206ENST00000465877 SLITRK3O94933 977 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 GJB5O95377 273 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 AMHP03971 560 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 CA3P07451 260 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 PDCP20941 246 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 TECP42680 631 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 GPC3P51654 580 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 POLGP54098 1239 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-206ENST00000465877 NPEPPSP55786 919 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 PTGDRQ13258 359 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 TPH2Q8IWU9 490 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 C4orf32Q8N8J7 132 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 LINC01599Q8WXQ3 324 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 HSD17B14Q9BPX1 270 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 SUGCTQ9HAC7 445 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 PADI3Q9ULW8 664 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 PPME1Q9Y570 386 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 MYH11P35749 1972 aa14.43□□□□□ -0.1
COL5A1-206ENST00000465877 LAD1O00515 517 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 RPS6KA5O75582 802 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 LYPLA2O95372 231 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 CRYBB1P53674 252 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 NLRP11P59045 1033 aaKnown RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 EMC2Q15006 297 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 XKR9Q5GH70 373 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 HAUS3Q68CZ6 603 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 FERMT3Q86UX7 667 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 FAM228AQ86W67 206 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 CCDC43Q96MW1 224 aaKnown RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 SCLT1Q96NL6 688 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 FTHL17Q9BXU8 183 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 ZNF576Q9H609 170 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 SLC28A3Q9HAS3 691 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 CDHR5Q9HBB8 845 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 TUFT1Q9NNX1 390 aa14.42□□□□□ -0.1
COL5A1-206ENST00000465877 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
COL5A1-206ENST00000465877 LCHNA4D1U4 455 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ZBTB39O15060 712 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 MED24O75448 989 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 SYT1P21579 422 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 RFC5P40937 340 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 PRPHP41219 470 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ATP2C1P98194 919 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-206ENST00000465877 FAM117BQ6P1L5 589 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 OTUD6AQ7L8S5 288 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ZNF710Q8N1W2 664 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ERMNQ8TAM6 284 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ZNF668Q96K58 619 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
COL5A1-206ENST00000465877 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
COL5A1-206ENST00000465877 ARHGEF15O94989 841 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 DNM2P50570 870 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 NFX1Q12986 1120 aaKnown RBP14.4□□□□□ -0.1
COL5A1-206ENST00000465877 CATSPER3Q86XQ3 398 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 RHPN2Q8IUC4 686 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms