RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NFX1Q12986 1120 aaKnown RBP24.51■■□□□ 1.51
LIME1-203ENST00000465591 PPP2R5CQ13362 524 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 EPC2Q52LR7 807 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 DIS3L2Q8IYB7 885 aaKnown RBP24.51■■□□□ 1.51
LIME1-203ENST00000465591 FBXO22Q8NEZ5 403 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 ZNF668Q96K58 619 aaPredicted RBP24.51■■□□□ 1.51
LIME1-203ENST00000465591 FAM20AQ96MK3 541 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 FTHL17Q9BXU8 183 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 KIAA1671Q9BY89 1806 aa24.51■■□□□ 1.51
LIME1-203ENST00000465591 RPS6KA5O75582 802 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 CRYBB1P53674 252 aaPredicted RBP24.5■■□□□ 1.51
LIME1-203ENST00000465591 DRP2Q13474 957 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 FAM228AQ86W67 206 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 ZNF689Q96CS4 500 aaPredicted RBP24.5■■□□□ 1.51
LIME1-203ENST00000465591 NIFKQ9BYG3 293 aaKnown RBP24.5■■□□□ 1.51
LIME1-203ENST00000465591 ADAMTS10Q9H324 1103 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 WRAP73Q9P2S5 460 aaPredicted RBP24.5■■□□□ 1.51
LIME1-203ENST00000465591 THEGQ9P2T0 379 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 SEPT9Q9UHD8 586 aaPredicted RBP24.5■■□□□ 1.51
LIME1-203ENST00000465591 ST3GAL5Q9UNP4 418 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 ATG2AQ2TAZ0 1938 aa24.5■■□□□ 1.51
LIME1-203ENST00000465591 DGKIO75912 1065 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 NLRP11P59045 1033 aaKnown RBP24.49■■□□□ 1.51
LIME1-203ENST00000465591 GUCY1B3Q02153 619 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 MTERF2Q49AM1 385 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 XKR3Q5GH77 459 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 BRMS1Q9HCU9 246 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 AKT3Q9Y243 479 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 ADGRA3Q8IWK6 1321 aa24.49■■□□□ 1.51
LIME1-203ENST00000465591 TBX3O15119 743 aa24.48■■□□□ 1.51
LIME1-203ENST00000465591 RBM25P49756 843 aaKnown RBP24.48■■□□□ 1.51
LIME1-203ENST00000465591 SPIRE1Q08AE8 756 aa24.48■■□□□ 1.51
LIME1-203ENST00000465591 TBC1D8BQ0IIM8 1120 aa24.48■■□□□ 1.51
LIME1-203ENST00000465591 ANO5Q75V66 913 aa24.48■■□□□ 1.51
LIME1-203ENST00000465591 TMEM192Q8IY95 271 aa24.48■■□□□ 1.51
LIME1-203ENST00000465591 FNDC1Q4ZHG4 1894 aaPredicted RBP24.47■■□□□ 1.51
LIME1-203ENST00000465591 DDX11L8A8MPP1 907 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 GATMP50440 423 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 PSMC5P62195 406 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 PLA2G4FQ68DD2 849 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 NPAS4Q8IUM7 802 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 FIBCD1Q8N539 461 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 SAMD11Q96NU1 681 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 MAP7D2Q96T17 732 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 NAP1L4Q99733 375 aaKnown RBP24.47■■□□□ 1.51
LIME1-203ENST00000465591 LMCD1Q9NZU5 365 aa24.47■■□□□ 1.51
LIME1-203ENST00000465591 TCF20Q9UGU0 1960 aaKnown RBP24.47■■□□□ 1.51
LIME1-203ENST00000465591 IGKV6-21A0A0C4DH24 114 aa24.46■■□□□ 1.51
LIME1-203ENST00000465591 IBSPP21815 317 aaPredicted RBP24.46■■□□□ 1.51
LIME1-203ENST00000465591 GPC3P51654 580 aa24.46■■□□□ 1.51
LIME1-203ENST00000465591 TFF2Q03403 129 aa24.46■■□□□ 1.51
LIME1-203ENST00000465591 SKIV2LQ15477 1246 aaKnown RBP24.46■■□□□ 1.51
LIME1-203ENST00000465591 ATXN2LQ8WWM7 1075 aaKnown RBP24.46■■□□□ 1.51
LIME1-203ENST00000465591 ADAM2Q99965 735 aa24.46■■□□□ 1.51
LIME1-203ENST00000465591 NCOR1O75376 2440 aa24.45■■□□□ 1.51
LIME1-203ENST00000465591 ARID2Q68CP9 1835 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 GPR182O15218 404 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 TMOD1P28289 359 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 QARSP47897 775 aaKnown RBP24.45■■□□□ 1.5
LIME1-203ENST00000465591 TRIM29Q14134 588 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 BTG3Q14201 252 aaPredicted RBP24.45■■□□□ 1.5
LIME1-203ENST00000465591 DSC3Q14574 896 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 TJAP1Q5JTD0 557 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 ZNF579Q8NAF0 562 aaKnown RBP24.45■■□□□ 1.5
LIME1-203ENST00000465591 LLPHQ9BRT6 129 aaKnown RBP24.45■■□□□ 1.5
LIME1-203ENST00000465591 RGS18Q9NS28 235 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 RGL1Q9NZL6 768 aa24.45■■□□□ 1.5
LIME1-203ENST00000465591 C9IYK1 514 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 H3BNC9 293 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 CTNNB1P35222 781 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 SARSP49591 514 aaKnown RBP24.44■■□□□ 1.5
LIME1-203ENST00000465591 NPEPPSP55786 919 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 GPM6BQ13491 265 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 EPHA7Q15375 998 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 NCAPH2Q6IBW4 605 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 CLP1Q92989 425 aaKnown RBP24.44■■□□□ 1.5
LIME1-203ENST00000465591 ZSCAN31Q96LW9 406 aaPredicted RBP24.44■■□□□ 1.5
LIME1-203ENST00000465591 ASB2Q96Q27 587 aa24.44■■□□□ 1.5
LIME1-203ENST00000465591 MRPL42Q9Y6G3 142 aaKnown RBP24.44■■□□□ 1.5
LIME1-203ENST00000465591 XIRP2A4UGR9 3374 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 MARCH6O60337 910 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 P4HBP07237 508 aaKnown RBP24.43■■□□□ 1.5
LIME1-203ENST00000465591 FGFR4P22455 802 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 BMPR1AP36894 532 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 PAN2Q504Q3 1202 aaKnown RBP24.43■■□□□ 1.5
LIME1-203ENST00000465591 SLFN12Q8IYM2 578 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 DYDC2Q96IM9 177 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 C8orf76Q96K31 380 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 LXNQ9BS40 222 aa24.43■■□□□ 1.5
LIME1-203ENST00000465591 DENND3A2RUS2 1198 aa24.42■■□□□ 1.5
LIME1-203ENST00000465591 C5orf67F2Z3F1 127 aa24.42■■□□□ 1.5
LIME1-203ENST00000465591 ZBTB39O15060 712 aa24.42■■□□□ 1.5
LIME1-203ENST00000465591 MAFO75444 373 aaPredicted RBP24.42■■□□□ 1.5
LIME1-203ENST00000465591 CSDE1O75534 798 aaKnown RBP24.42■■□□□ 1.5
LIME1-203ENST00000465591 STAG3L1P0CL83 205 aa24.42■■□□□ 1.5
LIME1-203ENST00000465591 DARSP14868 501 aaKnown RBP24.42■■□□□ 1.5
LIME1-203ENST00000465591 EIF4BP23588 611 aaKnown RBP24.42■■□□□ 1.5
LIME1-203ENST00000465591 MRPS5P82675 430 aaKnown RBP24.42■■□□□ 1.5
LIME1-203ENST00000465591 CALCRLQ16602 461 aa24.42■■□□□ 1.5
LIME1-203ENST00000465591 CMTR2Q8IYT2 770 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms