RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 CEP131Q9UPN4 1083 aa19.34■□□□□ 0.69
TOM1-213ENST00000465529 AKT3Q9Y243 479 aa19.34■□□□□ 0.69
TOM1-213ENST00000465529 BRWD1Q9NSI6 2320 aa19.34■□□□□ 0.69
TOM1-213ENST00000465529 FNDC1Q4ZHG4 1894 aaPredicted RBP19.33■□□□□ 0.69
TOM1-213ENST00000465529 CCNT1O60563 726 aaKnown RBP19.33■□□□□ 0.68
TOM1-213ENST00000465529 DGKIO75912 1065 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 CSPG5O95196 566 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 XBP1P17861 261 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 CTNNB1P35222 781 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 MTERF2Q49AM1 385 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 PAN2Q504Q3 1202 aaKnown RBP19.33■□□□□ 0.68
TOM1-213ENST00000465529 POTEDQ86YR6 584 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 TNFRSF25Q93038 417 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 FTHL17Q9BXU8 183 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 NRBP2Q9NSY0 501 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 VAV3Q9UKW4 847 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 ST3GAL5Q9UNP4 418 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 MYO7AQ13402 2215 aa19.33■□□□□ 0.68
TOM1-213ENST00000465529 H3BNC9 293 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 WNT7AO00755 349 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 KRT2P35908 639 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 NLRP11P59045 1033 aaKnown RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 BTG3Q14201 252 aaPredicted RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 TARBP2Q15633 366 aaKnown RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 NPAS4Q8IUM7 802 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 HAS1Q92839 578 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 SAMD11Q96NU1 681 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 NECAB3Q96P71 396 aaPredicted RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 CEP89Q96ST8 783 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 LMCD1Q9NZU5 365 aa19.32■□□□□ 0.68
TOM1-213ENST00000465529 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
TOM1-213ENST00000465529 TTC28Q96AY4 2481 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 MAGEB2O15479 319 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 PLA2G4FQ68DD2 849 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 PPP4R3AQ6IN85 833 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 RDM1Q8NG50 284 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 ADAMTS19Q8TE59 1207 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 WASF1Q92558 559 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 SYMPKQ92797 1274 aaKnown RBP19.31■□□□□ 0.68
TOM1-213ENST00000465529 KIF2CQ99661 725 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 ADAM2Q99965 735 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 ADAMTS10Q9H324 1103 aa19.31■□□□□ 0.68
TOM1-213ENST00000465529 WRAP73Q9P2S5 460 aaPredicted RBP19.31■□□□□ 0.68
TOM1-213ENST00000465529 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 FGFR4P22455 802 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 TBC1D8BQ0IIM8 1120 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 CCDC83Q8IWF9 413 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 MRPL38Q96DV4 380 aaKnown RBP19.3■□□□□ 0.68
TOM1-213ENST00000465529 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 HCSTQ9UBK5 93 aa19.3■□□□□ 0.68
TOM1-213ENST00000465529 MUC3AQ02505 3323 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 PLXNA4Q9HCM2 1894 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 DENND3A2RUS2 1198 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 DDX11L8A8MPP1 907 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 GRM6O15303 877 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 CSDE1O75534 798 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 MMP1P03956 469 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 BMP1P13497 986 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 GCFC2P16383 781 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 BMPR1AP36894 532 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 SARSP49591 514 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 GPC3P51654 580 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 GUCY1B3Q02153 619 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 PPP2R5CQ13362 524 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 XKR3Q5GH77 459 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 ANO5Q75V66 913 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 ZNF579Q8NAF0 562 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 CLP1Q92989 425 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 HLA-CQ95604 372 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 NIFKQ9BYG3 293 aaKnown RBP19.29■□□□□ 0.68
TOM1-213ENST00000465529 RGS18Q9NS28 235 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 LRFN2Q9ULH4 789 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 ARID2Q68CP9 1835 aa19.29■□□□□ 0.68
TOM1-213ENST00000465529 C9IYK1 514 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 C5orf67F2Z3F1 127 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 GPR182O15218 404 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 STAG3L1P0CL83 205 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 TMOD1P28289 359 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 NPEPPSP55786 919 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 PSMC5P62195 406 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 DSC3Q14574 896 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 TCEAL5Q5H9L2 206 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 FAM102BQ5T8I3 360 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 NCAPH2Q6IBW4 605 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
TOM1-213ENST00000465529 CMTR2Q8IYT2 770 aaKnown RBP19.28■□□□□ 0.68
TOM1-213ENST00000465529 FAM20AQ96MK3 541 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
TOM1-213ENST00000465529 COG5Q9UP83 839 aa19.28■□□□□ 0.68
TOM1-213ENST00000465529 SPIRE1Q08AE8 756 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 IL27Q8NEV9 243 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 NLRP7Q8WX94 980 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 UHRF1Q96T88 793 aaPredicted RBP19.27■□□□□ 0.68
TOM1-213ENST00000465529 BRMS1Q9HCU9 246 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 BMP2KQ9NSY1 1161 aaPredicted RBP19.27■□□□□ 0.68
TOM1-213ENST00000465529 RGL1Q9NZL6 768 aa19.27■□□□□ 0.68
TOM1-213ENST00000465529 LIMCH1Q9UPQ0 1083 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms