RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 RASGRP4Q8TDF6 673 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 LENG9Q96B70 501 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 MFSD14AQ96MC6 490 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 NEK1Q96PY6 1258 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 CDCA3Q99618 268 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 S1PR5Q9H228 398 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ELAC1Q9H777 363 aaKnown RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 GINS2Q9Y248 185 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 V9GY48 417 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 DENND4AQ7Z401 1863 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 PLXNA3P51805 1871 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 DENND3A2RUS2 1198 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 IPO5O00410 1097 aaKnown RBP12.43□□□□□ -0.42
COL11A1-207ENST00000465209 BACH1O14867 736 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 VTNP04004 478 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 TCF15Q12870 199 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PKN1Q16512 942 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-207ENST00000465209 JAKMIP3Q5VZ66 844 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 SWSAP1Q6NVH7 229 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PLA2G4DQ86XP0 818 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-207ENST00000465209 CASD1Q96PB1 797 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 GLT8D2Q9H1C3 349 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 TLE6Q9H808 572 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 PCDHB12Q9Y5F1 795 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 DCHS1Q96JQ0 3298 aa12.43□□□□□ -0.42
COL11A1-207ENST00000465209 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 GPR182O15218 404 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 CIITAP33076 1130 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
COL11A1-207ENST00000465209 CLCN3P51790 818 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-207ENST00000465209 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-207ENST00000465209 MIS18BP1Q6P0N0 1132 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 SYCE2Q6PIF2 218 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 SKAP1Q86WV1 359 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 ADAMTS10Q9H324 1103 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 AAASQ9NRG9 546 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
COL11A1-207ENST00000465209 HIDE1A8MVS5 230 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF862O60290 1169 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 LAG3P18627 525 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-207ENST00000465209 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ODR4Q5SWX8 454 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 PLPP4Q5VZY2 271 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 SMAP1Q8IYB5 467 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-207ENST00000465209 THNSL1Q8IYQ7 743 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF577Q9BSK1 485 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 TMEM117Q9H0C3 514 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF76P36508 570 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 PBX3P40426 434 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 VCPP55072 806 aaKnown RBP12.4□□□□□ -0.42
COL11A1-207ENST00000465209 CLLU1OSQ5K130 101 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
COL11A1-207ENST00000465209 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF598Q86UK7 904 aaKnown RBP12.4□□□□□ -0.42
COL11A1-207ENST00000465209 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 KCNB2Q92953 911 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 PBXIP1Q96AQ6 731 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 RPGRIP1Q96KN7 1286 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 TCF25Q9BQ70 676 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-207ENST00000465209 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 CDH22Q9UJ99 828 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 PCDHA10Q9Y5I2 948 aa12.4□□□□□ -0.42
COL11A1-207ENST00000465209 PSAPP07602 524 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 CPA1P15085 419 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 EIF4BP23588 611 aaKnown RBP12.39□□□□□ -0.43
COL11A1-207ENST00000465209 GPC3P51654 580 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 PTPN5P54829 565 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
COL11A1-207ENST00000465209 NTRK3Q16288 839 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 UGCGQ16739 394 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms