RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 FAM167AQ96KS9 214 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 RNF26Q9BY78 433 aaPredicted RBP25.79■■□□□ 1.72
USP42-205ENST00000465073 GABBR1Q9UBS5 961 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 SAMM50Q9Y512 469 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 TBKBP1A7MCY6 615 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 VTNP04004 478 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 UBE3AQ05086 875 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 NTRK3Q16288 839 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 TRMT1LQ7Z2T5 733 aaKnown RBP25.78■■□□□ 1.72
USP42-205ENST00000465073 ADGRD2Q7Z7M1 963 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 FAM228AQ86W67 206 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 ZNF710Q8N1W2 664 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 LENG9Q96B70 501 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 MSLNLQ96KJ4 702 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 PPP1R16BQ96T49 567 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 OSMRQ99650 979 aa25.78■■□□□ 1.72
USP42-205ENST00000465073 WDR64B1ANS9 1081 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 EYA4O95677 639 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 PSMA5P28066 241 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 FAM102BQ5T8I3 360 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 RASGRP4Q8TDF6 673 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 ELAC1Q9H777 363 aaKnown RBP25.77■■□□□ 1.72
USP42-205ENST00000465073 ATP6V0A4Q9HBG4 840 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 TMEM161AQ9NX61 479 aa25.77■■□□□ 1.72
USP42-205ENST00000465073 PPFIA3O75145 1194 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 IFNAR1P17181 557 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 TMOD1P28289 359 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 NRIP1P48552 1158 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 SLC26A6Q9BXS9 759 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 NRBP2Q9NSY0 501 aa25.76■■□□□ 1.71
USP42-205ENST00000465073 HOXD11P31277 338 aaPredicted RBP25.75■■□□□ 1.71
USP42-205ENST00000465073 USP11P51784 963 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 EVCP57679 992 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 DSC3Q14574 896 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 MICAL1Q8TDZ2 1067 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 MAP7D2Q96T17 732 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 RIT2Q99578 217 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 SH3GLB2Q9NR46 395 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 DISC1Q9NRI5 854 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 TYW1Q9NV66 732 aaKnown RBP25.75■■□□□ 1.71
USP42-205ENST00000465073 CLEC1BQ9P126 229 aa25.75■■□□□ 1.71
USP42-205ENST00000465073 REC8O95072 547 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 CLCN3P51790 818 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 COASYQ13057 564 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 EFCAB12Q6NXP0 572 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 RBM23Q86U06 439 aaKnown RBP25.74■■□□□ 1.71
USP42-205ENST00000465073 CCDC136Q96JN2 1154 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 TLE6Q9H808 572 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 VPS54Q9P1Q0 977 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 AKT3Q9Y243 479 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 EVPLQ92817 2033 aa25.74■■□□□ 1.71
USP42-205ENST00000465073 MSH4O15457 936 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 FGF18O76093 207 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 PDIA3P30101 505 aaKnown RBP25.73■■□□□ 1.71
USP42-205ENST00000465073 NLRP11P59045 1033 aaKnown RBP25.73■■□□□ 1.71
USP42-205ENST00000465073 PDE12Q6L8Q7 609 aaKnown RBP25.73■■□□□ 1.71
USP42-205ENST00000465073 LINC01465Q8N7H1 131 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 COLGALT1Q8NBJ5 622 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 SMRP1Q8NCR6 262 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 ADAMTS10Q9H324 1103 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 TLR9Q9NR96 1032 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 KIAA1671Q9BY89 1806 aa25.73■■□□□ 1.71
USP42-205ENST00000465073 EDIL3O43854 480 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 ZNF862O60290 1169 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 OATP04181 439 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 EIF4BP23588 611 aaKnown RBP25.72■■□□□ 1.71
USP42-205ENST00000465073 SFNP31947 248 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 THNSL1Q8IYQ7 743 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 MYH9P35579 1960 aaKnown RBP25.72■■□□□ 1.71
USP42-205ENST00000465073 FSD2A1L4K1 749 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 HOXA2O43364 376 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 GAS7O60861 476 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 FGFR1P11362 822 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 LAG3P18627 525 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 NLRP5P59047 1200 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 HERC4Q5GLZ8 1057 aaPredicted RBP25.72■■□□□ 1.71
USP42-205ENST00000465073 RNF135Q8IUD6 432 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 SLC5A5Q92911 643 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 TMEM117Q9H0C3 514 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 CWH43Q9H720 699 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 NCOA5Q9HCD5 579 aaKnown RBP25.72■■□□□ 1.71
USP42-205ENST00000465073 PCDHGC5Q9Y5F6 944 aa25.72■■□□□ 1.71
USP42-205ENST00000465073 ZSCAN20P17040 1043 aaPredicted RBP25.71■■□□□ 1.71
USP42-205ENST00000465073 JAK3P52333 1124 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 CCT2P78371 535 aaKnown RBP25.71■■□□□ 1.71
USP42-205ENST00000465073 PRKCEQ02156 737 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 LRRC71Q8N4P6 559 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 CDCA3Q99618 268 aaPredicted RBP25.71■■□□□ 1.71
USP42-205ENST00000465073 TEKT3Q9BXF9 490 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 C22orf23Q9BZE7 217 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 LZTS1Q9Y250 596 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 MUC6Q6W4X9 2439 aa25.71■■□□□ 1.71
USP42-205ENST00000465073 GLP2RO95838 553 aa25.7■■□□□ 1.7
USP42-205ENST00000465073 LRCH2Q5VUJ6 765 aa25.7■■□□□ 1.7
USP42-205ENST00000465073 TRIM22Q8IYM9 498 aa25.7■■□□□ 1.7
USP42-205ENST00000465073 HCSTQ9UBK5 93 aa25.7■■□□□ 1.7
USP42-205ENST00000465073 MUTYHQ9UIF7 546 aa25.7■■□□□ 1.7
USP42-205ENST00000465073 BARX2Q9UMQ3 279 aaPredicted RBP25.7■■□□□ 1.7
USP42-205ENST00000465073 FNDC1Q4ZHG4 1894 aaPredicted RBP25.69■■□□□ 1.7
USP42-205ENST00000465073 ERVFC1P60507 584 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms