RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CELF4Q9BZC1 486 aaKnown RBP15.29■□□□□ 0.04
LIMD1-203ENST00000465039 FAM49AQ9H0Q0 323 aaPredicted RBP15.29■□□□□ 0.04
LIMD1-203ENST00000465039 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
LIMD1-203ENST00000465039 EVPLQ92817 2033 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 ABHD14A-ACY1A0A1B0GW23 586 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 ASAP2O43150 1006 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 NBNO60934 754 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 FGBP02675 491 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CHRNA1P02708 482 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 UBA7P41226 1012 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CRYBB1P53674 252 aaPredicted RBP15.28■□□□□ 0.04
LIMD1-203ENST00000465039 EMC2Q15006 297 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 C16orf59Q7L2K0 433 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
LIMD1-203ENST00000465039 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
LIMD1-203ENST00000465039 LINC00301Q8NCQ3 95 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 SEPT8Q92599 483 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 VWCEQ96DN2 955 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CCSER1Q9C0I3 900 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 ATP6V0A4Q9HBG4 840 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 KCND2Q9NZV8 630 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 FBXO2Q9UK22 296 aaPredicted RBP15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 CDY2AQ9Y6F7 541 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 SIP14410 1827 aa15.28■□□□□ 0.04
LIMD1-203ENST00000465039 SCN5AQ14524 2016 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 CTSHP09668 335 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 TXLNAP40222 546 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 EPHB4P54760 987 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 POU5F1BQ06416 359 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 PKP1Q13835 747 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 MXD4Q14582 209 aaPredicted RBP15.27■□□□□ 0.04
LIMD1-203ENST00000465039 GPNMBQ14956 572 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 STK38Q15208 465 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.04
LIMD1-203ENST00000465039 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
LIMD1-203ENST00000465039 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.041e-7■■■■□ 21.5
LIMD1-203ENST00000465039 MMTAG2Q9BU76 263 aaKnown RBP15.27■□□□□ 0.04
LIMD1-203ENST00000465039 TIPINQ9BVW5 301 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 FTHL17Q9BXU8 183 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 DNM3Q9UQ16 869 aa15.27■□□□□ 0.04
LIMD1-203ENST00000465039 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 SPTLC2O15270 562 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 EYA4O95677 639 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 CLCN3P51790 818 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 NPEPPSP55786 919 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 IKBKEQ14164 716 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 PHOSPHO2Q8TCD6 241 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 CALML4Q96GE6 196 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 MTRQ99707 1265 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 NFKBIZQ9BYH8 718 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 IFIH1Q9BYX4 1025 aaKnown RBP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 INO80BQ9C086 356 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
LIMD1-203ENST00000465039 KIAA1024Q9UPX6 916 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 AKT3Q9Y243 479 aa15.26■□□□□ 0.03
LIMD1-203ENST00000465039 LAMA3Q16787 3333 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 ARHGEF35A5YM69 484 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 TMEM150BA6NC51 233 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 GPR32O75388 356 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 CYP11B2P19099 503 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 GPC3P51654 580 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 KRT85P78386 507 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 LPIN1Q14693 890 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 SHHQ15465 462 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 TRMT1LQ7Z2T5 733 aaKnown RBP15.25■□□□□ 0.03
LIMD1-203ENST00000465039 CABP7Q86V35 215 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 PIGOQ8TEQ8 1089 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 SLC9A7Q96T83 725 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 ADAMTS10Q9H324 1103 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 SUGCTQ9HAC7 445 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
LIMD1-203ENST00000465039 SUCLA2Q9P2R7 463 aaPredicted RBP15.25■□□□□ 0.03
LIMD1-203ENST00000465039 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 ZDHHC9Q9Y397 364 aa15.25■□□□□ 0.03
LIMD1-203ENST00000465039 PP2D1A8MPX8 630 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 GPR182O15218 404 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
LIMD1-203ENST00000465039 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
LIMD1-203ENST00000465039 PAK2Q13177 524 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 TFDP1Q14186 410 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 C9orf50Q5SZB4 431 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 PADI6Q6TGC4 694 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 DEFB128Q7Z7B8 93 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms