RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SCLT1Q96NL6 688 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 KRT12Q99456 494 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 TANGO6Q9C0B7 1094 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 GREM2Q9H772 168 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 MLXIPQ9HAP2 919 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 PPANQ9NQ55 473 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 DDX20Q9UHI6 824 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 TRMT112Q9UI30 125 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 DENND2AQ9ULE3 1009 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 MAPK8IP1Q9UQF2 711 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 LRRC53A6NM62 1247 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 MEN1O00255 615 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 ABLIM1O14639 778 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 PALMO75781 387 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 ATP5HO75947 161 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 PLEKHA8P1O95397 391 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 GLI1P08151 1106 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 RHOQP17081 205 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CCND1P24385 295 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 HPDP32754 393 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 HSD17B3P37058 310 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CEBPAP49715 358 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 USP11P51784 963 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 GUCY2FP51841 1108 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 LACTBP83111 547 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 ADCY2Q08462 1091 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 DHX34Q14147 1143 aaKnown RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 ASTE1Q2TB18 679 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 BTNL9Q6UXG8 535 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CEP128Q6ZU80 1094 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 SV2AQ7L0J3 742 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CYP2U1Q7Z449 544 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 MYOCDQ8IZQ8 938 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CCDC63Q8NA47 563 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CASKIN2Q8WXE0 1202 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CUL5Q93034 780 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 VTI1AQ96AJ9 217 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 PGM2Q96G03 612 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 INPP4AQ96PE3 977 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 RAB3IPQ96QF0 476 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 TRIM7Q9C029 511 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CCDC134Q9H6E4 229 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 PRM3Q9NNZ6 103 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 FAM207AQ9NSI2 230 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 SPATS2LQ9NUQ6 558 aaKnown RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 AIPL1Q9NZN9 384 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 MTRF1LQ9UGC7 380 aaKnown RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 SLC12A6Q9UHW9 1150 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 CNOT7Q9UIV1 285 aaKnown RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 TMEM59LQ9UK28 342 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 TTC7AQ9ULT0 858 aaPredicted RBP7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 COL4A3BPQ9Y5P4 624 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 LAMB2P55268 1798 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 MAST2Q6P0Q8 1798 aa7.83□□□□□ -1.16
CLSTN1-204ENST00000464286 KDM3AQ9Y4C1 1321 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 CDC14CA4D256 554 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 TSPY2A6NKD2 308 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 E7ENQ6 273 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 O00370 1275 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF263O14978 683 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 PRDM1O75626 825 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 KIF4AO95239 1232 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 GGPS1O95749 300 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 AGTP01019 485 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 IL2RBP14784 551 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 ATF3P18847 181 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 PLCG1P19174 1290 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 DRG2P55039 364 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 MARSP56192 900 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF844Q08AG5 666 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 KLHL30Q0D2K2 578 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 PDIA5Q14554 519 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 GRM4Q14833 912 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NAA25Q14CX7 972 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 ZRSR2Q15696 482 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NPY5RQ15761 445 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 KRT71Q3SY84 523 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 EARS2Q5JPH6 523 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 RNFT1Q5M7Z0 435 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 KRT79Q5XKE5 535 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SPTY2D1Q68D10 685 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 DENND2CQ68D51 928 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 TTC19Q6DKK2 380 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 NEK8Q86SG6 692 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 COL23A1Q86Y22 540 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SRBD1Q8N5C6 995 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SCFD2Q8WU76 684 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 UBLCP1Q8WVY7 318 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 CCT6BQ92526 530 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 ZBTB9Q96C00 473 aa7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 XPO6Q96QU8 1125 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-204ENST00000464286 SPAG5Q96R06 1193 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms