RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ALCAMQ13740 583 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 PDXDC1Q6P996 788 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 CACNA2D4Q7Z3S7 1137 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 PRRT2Q7Z6L0 340 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 GPR161Q8N6U8 529 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 DNERQ8NFT8 737 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 LSM14BQ9BX40 385 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 STRA6Q9BX79 667 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 NUCKS1Q9H1E3 243 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 MYO1AQ9UBC5 1043 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 PCDHA10Q9Y5I2 948 aa23.86■■□□□ 1.41
PDLIM2-216ENST00000464275 AKAP3O75969 853 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 AFPP02771 609 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 GNPTABQ3T906 1256 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 ZNF662Q6ZS27 426 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 RRAGAQ7L523 313 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 RIOX2Q8IUF8 465 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 PFASO15067 1338 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 CXCL11O14625 94 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 DKC1O60832 514 aaKnown RBP eCLIP23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 PPP1R37O75864 691 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 RGS20O76081 388 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 XRCC5P13010 732 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 HS2ST1Q7LGA3 356 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 GOLGA5Q8TBA6 731 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 MKNK1Q9BUB5 465 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 CARD6Q9BX69 1037 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 HAUS4Q9H6D7 363 aa23.85■■□□□ 1.41
PDLIM2-216ENST00000464275 LRRC53A6NM62 1247 aa23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 IPO7O95373 1038 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 EPHX2P34913 555 aa23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 CLCN6P51797 869 aa23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 TMCO3Q6UWJ1 677 aa23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 IRX2Q9BZI1 471 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 GBP3Q9H0R5 595 aa23.84■■□□□ 1.41
PDLIM2-216ENST00000464275 SPDYE5A6NIY4 337 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 SPATA31C2B4DYI2 1134 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 IRF6O14896 467 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 USO1O60763 962 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 NOL4O94818 638 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 PSMC2P35998 433 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 CASP4P49662 377 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 HERVK_113P62684 666 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 ZNF569Q5MCW4 686 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 ANKRD35Q8N283 1001 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 OTUD5Q96G74 571 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 CCDC42Q96M95 316 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 ZNF446Q9NWS9 450 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 BTBD7Q9P203 1132 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 K7ENM7 598 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 PLS3P13797 630 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 XKR9Q5GH70 373 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 RABGGTAQ92696 567 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 SYN2Q92777 582 aaPredicted RBP23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 DRC1Q96MC2 740 aa23.83■■□□□ 1.41
PDLIM2-216ENST00000464275 BACH1O14867 736 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 PSAPP07602 524 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 IRX3P78415 501 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 STXBP2Q15833 593 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 MAEAQ7L5Y9 396 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 KSR1Q8IVT5 923 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 LRRN4CLQ8ND94 238 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 BORCS6Q96GS4 357 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 CLMNQ96JQ2 1002 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 DMAC2Q9NW81 257 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 ARHGAP20Q9P2F6 1191 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 ZNFX1Q9P2E3 1918 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 TTLL12Q14166 644 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 MYBPC2Q14324 1141 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 OTUD6AQ7L8S5 288 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 KIAA1328Q86T90 577 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 FAM186BQ8IYM0 893 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 SYCP3Q8IZU3 236 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 ATP6V0A1Q93050 837 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 CRACR2AQ9BSW2 395 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 TMEM206Q9H813 350 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 JPH1Q9HDC5 661 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 AGPAT3Q9NRZ7 376 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 SLC9A2Q9UBY0 812 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 KCNH4Q9UQ05 1017 aa23.82■■□□□ 1.4
PDLIM2-216ENST00000464275 ZRANB2O95218 330 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 ICAM3P32942 547 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 PPIL2Q13356 520 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 DCAF17Q5H9S7 520 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 RSRC2Q7L4I2 434 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 SLC9A9Q8IVB4 645 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 GOLGA1Q92805 767 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 SPATC1LQ9H0A9 340 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 ST6GALNAC4Q9H4F1 302 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 NLRC4Q9NPP4 1024 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 PLCB1Q9NQ66 1216 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 GABBR1Q9UBS5 961 aa23.81■■□□□ 1.4
PDLIM2-216ENST00000464275 EIF3JO75822 258 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 ABL1P00519 1130 aa23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 SFMBT2Q5VUG0 894 aa23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 SLC35F6Q8N357 371 aa23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 SLC17A8Q8NDX2 589 aa23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 SLC35C1Q96A29 364 aa23.8■■□□□ 1.4
PDLIM2-216ENST00000464275 ACCSQ96QU6 501 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms