RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 CLIC4Q9Y696 253 aa23.36■■□□□ 1.33
CD58-204ENST00000464088 POTEB3A0JP26 581 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 STBD1O95210 358 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 GJB5O95377 273 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 BMP15O95972 392 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 DEFB103AP81534 67 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 ZNF200P98182 395 aaPredicted RBP23.35■■□□□ 1.33
CD58-204ENST00000464088 CNKSR3Q6P9H4 555 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 POTEBQ6S5H4 581 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 TMCO2Q7Z6W1 182 aaPredicted RBP23.35■■□□□ 1.33
CD58-204ENST00000464088 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.35■■□□□ 1.33
CD58-204ENST00000464088 ATP6V0A1Q93050 837 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 TGS1Q96RS0 853 aaKnown RBP23.35■■□□□ 1.33
CD58-204ENST00000464088 USP28Q96RU2 1077 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 HSD17B14Q9BPX1 270 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 SETD4Q9NVD3 440 aa23.35■■□□□ 1.33
CD58-204ENST00000464088 NRCAMQ92823 1304 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 C17orf102A2RUQ5 167 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 P4HBP07237 508 aaKnown RBP23.34■■□□□ 1.33
CD58-204ENST00000464088 INSRRP14616 1297 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 SELPP16109 830 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 PSMC5P62195 406 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 PPFIA1Q13136 1202 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 ARL6IP4Q66PJ3 421 aaKnown RBP23.34■■□□□ 1.33
CD58-204ENST00000464088 IGSF22Q8N9C0 903 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 BANK1Q8NDB2 785 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 LMBR1Q8WVP7 490 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 EIF2AK1Q9BQI3 630 aaKnown RBP23.34■■□□□ 1.33
CD58-204ENST00000464088 RGL1Q9NZL6 768 aa23.34■■□□□ 1.33
CD58-204ENST00000464088 WRAP73Q9P2S5 460 aaPredicted RBP23.34■■□□□ 1.33
CD58-204ENST00000464088 ABHD14A-ACY1A0A1B0GW23 586 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 LINC01553A4QN01 128 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 HBP1O60381 514 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 SLITRK3O94933 977 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 OATP04181 439 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 QARSP47897 775 aaKnown RBP23.33■■□□□ 1.33
CD58-204ENST00000464088 PRKCEQ02156 737 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 PDIA5Q14554 519 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 GRIK4Q16099 956 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 TMEM266Q2M3C6 531 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 MARCH8Q5T0T0 291 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 LRRC8DQ7L1W4 858 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 BBXQ8WY36 941 aaPredicted RBP23.33■■□□□ 1.33
CD58-204ENST00000464088 DHX38Q92620 1227 aaKnown RBP23.33■■□□□ 1.33
CD58-204ENST00000464088 DYDC2Q96IM9 177 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 CEP131Q9UPN4 1083 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 TRPC6Q9Y210 931 aa23.33■■□□□ 1.33
CD58-204ENST00000464088 MORC2Q9Y6X9 1032 aaPredicted RBP23.33■■□□□ 1.33
CD58-204ENST00000464088 MBLAC1A4D2B0 266 aaPredicted RBP23.32■■□□□ 1.32
CD58-204ENST00000464088 ZBTB42B2RXF5 422 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 TREHO43280 583 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 ALADP13716 330 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 NASPP49321 788 aaPredicted RBP23.32■■□□□ 1.32
CD58-204ENST00000464088 DTHD1Q6ZMT9 781 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 CKAP2LQ8IYA6 745 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 NEK9Q8TD19 979 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 FAM167AQ96KS9 214 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 LXNQ9BS40 222 aa23.32■■□□□ 1.32
CD58-204ENST00000464088 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
CD58-204ENST00000464088 COL1A2P08123 1366 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 RRN3P2A6NIE6 340 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 NBNO60934 754 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 EFCAB14O75071 495 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 SPATA31C1P0DKV0 1188 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 GNAT1P11488 350 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 CTTNQ14247 550 aaKnown RBP23.31■■□□□ 1.32
CD58-204ENST00000464088 TCTN1Q2MV58 587 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 SERINC5Q86VE9 423 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 C4orf19Q8IY42 314 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 TNPO1Q92973 898 aaKnown RBP23.31■■□□□ 1.32
CD58-204ENST00000464088 WNT8BQ93098 351 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 MTUS1Q9ULD2 1270 aa23.31■■□□□ 1.32
CD58-204ENST00000464088 GRXCR2A6NFK2 248 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 LYPLA2O95372 231 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 IL9P15248 144 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 KCNA5P22460 613 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 CYP4A11Q02928 519 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 PTK7Q13308 1070 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 TRIM71Q2Q1W2 868 aaKnown RBP23.3■■□□□ 1.32
CD58-204ENST00000464088 PUS10Q3MIT2 529 aaKnown RBP23.3■■□□□ 1.32
CD58-204ENST00000464088 XKR3Q5GH77 459 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 ZNF484Q5JVG2 852 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 TRAPPC12Q8WVT3 735 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 ZNF396Q96N95 335 aaPredicted RBP23.3■■□□□ 1.32
CD58-204ENST00000464088 NIFKQ9BYG3 293 aaKnown RBP23.3■■□□□ 1.32
CD58-204ENST00000464088 KCNH6Q9H252 994 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 NRBP2Q9NSY0 501 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 LRWD1Q9UFC0 647 aa23.3■■□□□ 1.32
CD58-204ENST00000464088 DKC1O60832 514 aaKnown RBP eCLIP23.29■■□□□ 1.32
CD58-204ENST00000464088 MED24O75448 989 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 CKBP12277 381 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 CEBPZQ03701 1054 aaKnown RBP23.29■■□□□ 1.32
CD58-204ENST00000464088 SLC39A14Q15043 492 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 TARBP2Q15633 366 aaKnown RBP23.29■■□□□ 1.32
CD58-204ENST00000464088 PTCRAQ6ISU1 281 aaPredicted RBP23.29■■□□□ 1.32
CD58-204ENST00000464088 ANO5Q75V66 913 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 CATSPER3Q86XQ3 398 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 EVPLQ92817 2033 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 CEP89Q96ST8 783 aa23.29■■□□□ 1.32
CD58-204ENST00000464088 POLR3CQ9BUI4 534 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms