RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MIS18BP1Q6P0N0 1132 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 PDXDC2PQ6P474 469 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 FAM228AQ86W67 206 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 BBXQ8WY36 941 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-210ENST00000464078 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
HMGN1-210ENST00000464078 CWH43Q9H720 699 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 TYW1Q9NV66 732 aaKnown RBP19.65■□□□□ 0.74
HMGN1-210ENST00000464078 TMEM260Q9NX78 707 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 HCSTQ9UBK5 93 aa19.65■□□□□ 0.74
HMGN1-210ENST00000464078 DDX39AO00148 427 aaKnown RBP19.64■□□□□ 0.73
HMGN1-210ENST00000464078 PER2O15055 1255 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 ZBTB43O43298 467 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 CYP3A4P08684 503 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 ATP4AP20648 1035 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 PLCB3Q01970 1234 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 KIZQ2M2Z5 673 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 IER5LQ5T953 404 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 RNF20Q5VTR2 975 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 PLA2G4DQ86XP0 818 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 MRPS27Q92552 414 aaKnown RBP19.64■□□□□ 0.73
HMGN1-210ENST00000464078 OSMRQ99650 979 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 TMEM117Q9H0C3 514 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 ATP6V0A4Q9HBG4 840 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 BRPF3Q9ULD4 1205 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 MAFBQ9Y5Q3 323 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-210ENST00000464078 V9GY48 417 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-210ENST00000464078 WDR81Q562E7 1941 aa19.64■□□□□ 0.73
HMGN1-210ENST00000464078 HOXA2O43364 376 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 GPR32O75388 356 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 FGFR1P11362 822 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 IBSPP21815 317 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-210ENST00000464078 PPM1AP35813 382 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 ZNF76P36508 570 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 SETQ01105 290 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-210ENST00000464078 EXOSC10Q01780 885 aaKnown RBP19.63■□□□□ 0.73
HMGN1-210ENST00000464078 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-210ENST00000464078 SWSAP1Q6NVH7 229 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 SMAP1Q8IYB5 467 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-210ENST00000464078 ZNF710Q8N1W2 664 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 ASIC4Q96FT7 647 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 RPGRIP1Q96KN7 1286 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 S1PR5Q9H228 398 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 TBC1D22BQ9NU19 505 aa19.63■□□□□ 0.73
HMGN1-210ENST00000464078 ESYT2A0FGR8 921 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 HOXB8P17481 243 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-210ENST00000464078 TCF15Q12870 199 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 PTPN21Q16825 1174 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 MCTP2Q6DN12 878 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 ANKRD54Q6NXT1 300 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 LRRC43Q8N309 656 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 PHOX2BQ99453 314 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 NGRNQ9NPE2 291 aaKnown RBP19.62■□□□□ 0.73
HMGN1-210ENST00000464078 CEP131Q9UPN4 1083 aa19.62■□□□□ 0.73
HMGN1-210ENST00000464078 VTNP04004 478 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 SYCE2Q6PIF2 218 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
HMGN1-210ENST00000464078 LINC01465Q8N7H1 131 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 CASD1Q96PB1 797 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 TCF25Q9BQ70 676 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 FAM217BQ9NTX9 383 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-210ENST00000464078 RNF19AQ9NV58 838 aa19.61■□□□□ 0.73
HMGN1-210ENST00000464078 PUF60Q9UHX1 559 aaKnown RBP19.61■□□□□ 0.73
HMGN1-210ENST00000464078 GOLGA8AA7E2F4 631 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 MAGEB2O15479 319 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 PFKFB3Q16875 520 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-210ENST00000464078 TSGA10IPQ3SY00 556 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 PLPP4Q5VZY2 271 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 KCNT2Q6UVM3 1135 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 LRRC55Q6ZSA7 311 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 CKAP2LQ8IYA6 745 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 METTL13Q8N6R0 699 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 FAM167AQ96KS9 214 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 ZNF558Q96NG5 402 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 ZNF577Q9BSK1 485 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 ZMYND12Q9H0C1 365 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 ENTPD7Q9NQZ7 604 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 PCDHA10Q9Y5I2 948 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 SPTBN4Q9H254 2564 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 CFAP54Q96N23 3096 aa19.6■□□□□ 0.73
HMGN1-210ENST00000464078 PSAPP07602 524 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 CDC27P30260 824 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 TECP42680 631 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 APOBRQ0VD83 1088 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 JAKMIP3Q5VZ66 844 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 REXO1Q8N1G1 1221 aaKnown RBP19.59■□□□□ 0.73
HMGN1-210ENST00000464078 MAP7D2Q96T17 732 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 PPP1R16BQ96T49 567 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 ADAMTS10Q9H324 1103 aa19.59■□□□□ 0.73
HMGN1-210ENST00000464078 KLF18A0A0U1RQI7 1052 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 HIDE1A8MVS5 230 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 EIF4BP23588 611 aaKnown RBP19.58■□□□□ 0.72
HMGN1-210ENST00000464078 CIITAP33076 1130 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 CLCN3P51790 818 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 NUBP1P53384 320 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 TCEANC2Q96MN5 208 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 TCEAL9Q9UHQ7 104 aa19.58■□□□□ 0.72
HMGN1-210ENST00000464078 NID2Q14112 1375 aa19.57■□□□□ 0.72
HMGN1-210ENST00000464078 RIF1Q5UIP0 2472 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms