RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 CDC42EP1Q00587 391 aa29.24■■■□□ 2.27
SURF1-203ENST00000463965 ODR4Q5SWX8 454 aa29.24■■■□□ 2.27
SURF1-203ENST00000463965 LINC01465Q8N7H1 131 aa29.24■■■□□ 2.27
SURF1-203ENST00000463965 ANKEF1Q9NU02 776 aa29.24■■■□□ 2.27
SURF1-203ENST00000463965 XRCC6P12956 609 aaKnown RBP eCLIP29.23■■■□□ 2.27
SURF1-203ENST00000463965 POLGP54098 1239 aaPredicted RBP29.23■■■□□ 2.27
SURF1-203ENST00000463965 NPEPPSP55786 919 aa29.23■■■□□ 2.27
SURF1-203ENST00000463965 WDR5P61964 334 aaKnown RBP29.23■■■□□ 2.27
SURF1-203ENST00000463965 RAB30Q15771 203 aa29.23■■■□□ 2.27
SURF1-203ENST00000463965 CEP89Q96ST8 783 aa29.23■■■□□ 2.27
SURF1-203ENST00000463965 ZSCAN16Q9H4T2 348 aaPredicted RBP29.23■■■□□ 2.27
SURF1-203ENST00000463965 MSRAQ9UJ68 235 aa29.23■■■□□ 2.27
SURF1-203ENST00000463965 MTMR6Q9Y217 621 aa29.23■■■□□ 2.27
SURF1-203ENST00000463965 RPA1P27694 616 aa29.22■■■□□ 2.27
SURF1-203ENST00000463965 CRYBB1P53674 252 aaPredicted RBP29.22■■■□□ 2.27
SURF1-203ENST00000463965 KIZQ2M2Z5 673 aa29.22■■■□□ 2.27
SURF1-203ENST00000463965 ARL6IP4Q66PJ3 421 aaKnown RBP29.22■■■□□ 2.27
SURF1-203ENST00000463965 CATSPER3Q86XQ3 398 aa29.22■■■□□ 2.27
SURF1-203ENST00000463965 SCLT1Q96NL6 688 aa29.22■■■□□ 2.27
SURF1-203ENST00000463965 IGKV6-21A0A0C4DH24 114 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 GRXCR1A8MXD5 290 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 GAS2O43903 313 aaKnown RBP29.21■■■□□ 2.27
SURF1-203ENST00000463965 AMHP03971 560 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 MUTP22033 750 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 PAK2Q13177 524 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 FAM109BQ6ICB4 259 aaPredicted RBP29.21■■■□□ 2.27
SURF1-203ENST00000463965 FAM43BQ6ZT52 329 aaPredicted RBP29.21■■■□□ 2.27
SURF1-203ENST00000463965 IGSF22Q8N9C0 903 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 NACC1Q96RE7 527 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 OSBPL7Q9BZF2 842 aa29.21■■■□□ 2.27
SURF1-203ENST00000463965 MED24O75448 989 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 SPATA31C1P0DKV0 1188 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 CCT6AP40227 531 aaKnown RBP29.2■■■□□ 2.26
SURF1-203ENST00000463965 NLRP11P59045 1033 aaKnown RBP29.2■■■□□ 2.26
SURF1-203ENST00000463965 RESTQ13127 1097 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 TCTN1Q2MV58 587 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 KRT79Q5XKE5 535 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 PPP1R16BQ96T49 567 aa29.2■■■□□ 2.26
SURF1-203ENST00000463965 SUCLA2Q9P2R7 463 aaPredicted RBP29.2■■■□□ 2.26
SURF1-203ENST00000463965 ZBTB39O15060 712 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 GPR32O75388 356 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 RPS6KA5O75582 802 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 DNAJB2P25686 324 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 CD52P31358 61 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 SPRYD3Q8NCJ5 442 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 PIGOQ8TEQ8 1089 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 TCP11Q8WWU5 503 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 OSMRQ99650 979 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 FTHL17Q9BXU8 183 aa29.19■■■□□ 2.26
SURF1-203ENST00000463965 DHX33Q9H6R0 707 aaKnown RBP29.19■■■□□ 2.26
SURF1-203ENST00000463965 AGO3Q9H9G7 860 aaKnown RBP29.19■■■□□ 2.26
SURF1-203ENST00000463965 GPR182O15218 404 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 BECN1Q14457 450 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 ZNF697Q5TEC3 545 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 HERC6Q8IVU3 1022 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 ZNF579Q8NAF0 562 aaKnown RBP29.18■■■□□ 2.26
SURF1-203ENST00000463965 SNX29Q8TEQ0 813 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 NLRP7Q8WX94 980 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 ZBED2Q9BTP6 218 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 PBX4Q9BYU1 374 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 CDHR5Q9HBB8 845 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 PADI3Q9ULW8 664 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 PCDHA11Q9Y5I1 949 aa29.18■■■□□ 2.26
SURF1-203ENST00000463965 TMEM265A0A087WTH1 108 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 DGAT1O75907 488 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 GPC3P51654 580 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 NFX1Q12986 1120 aaKnown RBP29.17■■■□□ 2.26
SURF1-203ENST00000463965 EMC2Q15006 297 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 SF3A1Q15459 793 aaKnown RBP29.17■■■□□ 2.26
SURF1-203ENST00000463965 TIFAQ96CG3 184 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 MTRQ99707 1265 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 ADAMTS10Q9H324 1103 aa29.17■■■□□ 2.26
SURF1-203ENST00000463965 DBR1Q9UK59 544 aaKnown RBP29.17■■■□□ 2.26
SURF1-203ENST00000463965 VWA3AA6NCI4 1184 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 RARRES1P49788 294 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 DEFB103AP81534 67 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 MKRN4PQ13434 485 aaPredicted RBP29.16■■■□□ 2.26
SURF1-203ENST00000463965 DRP2Q13474 957 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 IL17AQ16552 155 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 POTEGQ6S5H5 508 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 RHPN2Q8IUC4 686 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 MYOCDQ8IZQ8 938 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 PSPC1Q8WXF1 523 aaKnown RBP29.16■■■□□ 2.26
SURF1-203ENST00000463965 GCOM2Q9BZD3 368 aaPredicted RBP29.16■■■□□ 2.26
SURF1-203ENST00000463965 ATP6V0A4Q9HBG4 840 aa29.16■■■□□ 2.26
SURF1-203ENST00000463965 NOC2LQ9Y3T9 749 aaKnown RBP29.16■■■□□ 2.26
SURF1-203ENST00000463965 LAMA2P24043 3122 aaKnown RBP29.16■■■□□ 2.26
SURF1-203ENST00000463965 EIF4BP23588 611 aaKnown RBP29.15■■■□□ 2.26
SURF1-203ENST00000463965 PBX2P40425 430 aa29.15■■■□□ 2.26
SURF1-203ENST00000463965 RABGGTBP53611 331 aa29.15■■■□□ 2.26
SURF1-203ENST00000463965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.15■■■□□ 2.26
SURF1-203ENST00000463965 ZNF410Q86VK4 478 aa29.15■■■□□ 2.26
SURF1-203ENST00000463965 BMP2KQ9NSY1 1161 aaPredicted RBP29.15■■■□□ 2.26
SURF1-203ENST00000463965 ASAP2O43150 1006 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 TLL1O43897 1013 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 DEFB123Q8N688 67 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 TMEM40Q8WWA1 233 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 TMEM143Q96AN5 459 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 INO80BQ9C086 356 aaPredicted RBP29.14■■■□□ 2.26
SURF1-203ENST00000463965 ST3GAL5Q9UNP4 418 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms