RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 MBOAT7Q96N66 472 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 RGS18Q9NS28 235 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 AKT3Q9Y243 479 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 XIRP2A4UGR9 3374 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 DTNBO60941 627 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 TMOD1P28289 359 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 NLRP11P59045 1033 aaKnown RBP21.26■□□□□ 0.99
SF3A1-205ENST00000463818 INF2Q27J81 1249 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 KRT25Q7Z3Z0 450 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 FAM228AQ86W67 206 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 LRRC71Q8N4P6 559 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 LINC01465Q8N7H1 131 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 RDM1Q8NG50 284 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 MAP7D2Q96T17 732 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 ALG13Q9NP73 1137 aaKnown RBP21.26■□□□□ 0.99
SF3A1-205ENST00000463818 C1orf112Q9NSG2 853 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 PLAGL2Q9UPG8 496 aa21.26■□□□□ 0.99
SF3A1-205ENST00000463818 C9IYK1 514 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 ANAPC15P60006 121 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 MOXD1Q6UVY6 613 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 B3GNT9Q6UX72 402 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 EP400NLQ6ZTU2 488 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 SLC24A5Q71RS6 500 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 ETNPPLQ8TBG4 499 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 PABPC5Q96DU9 382 aaKnown RBP21.25■□□□□ 0.99
SF3A1-205ENST00000463818 PHF20Q9BVI0 1012 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 ADAMTS10Q9H324 1103 aa21.25■□□□□ 0.99
SF3A1-205ENST00000463818 DDX25Q9UHL0 483 aaKnown RBP21.25■□□□□ 0.99
SF3A1-205ENST00000463818 XBP1P17861 261 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 AK2P54819 239 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 FAM189BP81408 668 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 ANKRD1Q15327 319 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 TARBP2Q15633 366 aaKnown RBP21.24■□□□□ 0.99
SF3A1-205ENST00000463818 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 FAM102BQ5T8I3 360 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 NEK9Q8TD19 979 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 P2RX5Q93086 422 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 GJB4Q9NTQ9 266 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
SF3A1-205ENST00000463818 BRWD1Q9NSI6 2320 aa21.24■□□□□ 0.99
SF3A1-205ENST00000463818 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 H3BQ06 376 aaPredicted RBP21.23■□□□□ 0.99
SF3A1-205ENST00000463818 STBD1O95210 358 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 CTDNEP1O95476 244 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 TBC1D8BQ0IIM8 1120 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 CAMK1Q14012 370 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 DSC3Q14574 896 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 COL19A1Q14993 1142 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 XKR3Q5GH77 459 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 PTCRAQ6ISU1 281 aaPredicted RBP21.23■□□□□ 0.99
SF3A1-205ENST00000463818 ZNF710Q8N1W2 664 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 KLHL23Q8NBE8 558 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 SPPL3Q8TCT6 385 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 ZNF668Q96K58 619 aaPredicted RBP21.23■□□□□ 0.99
SF3A1-205ENST00000463818 NIFKQ9BYG3 293 aaKnown RBP21.23■□□□□ 0.99
SF3A1-205ENST00000463818 STK36Q9NRP7 1315 aa21.23■□□□□ 0.99
SF3A1-205ENST00000463818 TBKBP1A7MCY6 615 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 NCK2O43639 380 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 SLC37A4O43826 429 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 CSPG5O95196 566 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 MMP1P03956 469 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 ITGB1P05556 798 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 EIF4BP23588 611 aaKnown RBP21.22■□□□□ 0.99
SF3A1-205ENST00000463818 OXER1Q8TDS5 423 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 ATP6V0A4Q9HBG4 840 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 CLDND1Q9NY35 253 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 ORC3Q9UBD5 711 aaPredicted RBP21.22■□□□□ 0.99
SF3A1-205ENST00000463818 MYO7AQ13402 2215 aa21.22■□□□□ 0.99
SF3A1-205ENST00000463818 GRXCR2A6NFK2 248 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 DDX11L8A8MPP1 907 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 IL9P15248 144 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 DNAJB1P25685 340 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 GPC3P51654 580 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 HYAL1Q12794 435 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 PUS10Q3MIT2 529 aaKnown RBP21.21■□□□□ 0.99
SF3A1-205ENST00000463818 MTERF2Q49AM1 385 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 NECAB1Q8N987 351 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 SH2D3AQ9BRG2 576 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 IGFLR1Q9H665 355 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 TMEM161AQ9NX61 479 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 SEPT9Q9UHD8 586 aaPredicted RBP21.21■□□□□ 0.99
SF3A1-205ENST00000463818 MUC3AQ02505 3323 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 BDP1A6H8Y1 2624 aa21.21■□□□□ 0.99
SF3A1-205ENST00000463818 TMEM150BA6NC51 233 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 EML1O00423 815 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 ZSCAN20P17040 1043 aaPredicted RBP21.2■□□□□ 0.98
SF3A1-205ENST00000463818 DRP2Q13474 957 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 SPOUT1Q5T280 376 aaKnown RBP21.2■□□□□ 0.98
SF3A1-205ENST00000463818 PPP4R3AQ6IN85 833 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 PIK3AP1Q6ZUJ8 805 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 NEK8Q86SG6 692 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 FAM178BQ8IXR5 827 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 WASF1Q92558 559 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 FAM20AQ96MK3 541 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 CEP89Q96ST8 783 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 EPHX3Q9H6B9 360 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 ELAC1Q9H777 363 aaKnown RBP21.2■□□□□ 0.98
SF3A1-205ENST00000463818 CD320Q9NPF0 282 aa21.2■□□□□ 0.98
SF3A1-205ENST00000463818 EVPLQ92817 2033 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms