RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 FIZ1Q96SL8 496 aa20.99■□□□□ 0.95
CCDC78-206ENST00000463539 INTS13Q9NVM9 706 aa20.99■□□□□ 0.95
CCDC78-206ENST00000463539 UBE4BO95155 1302 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 EMSYQ7Z589 1322 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 LGR5O75473 907 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 ZNF720Q7Z2F6 126 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 MCPH1Q8NEM0 835 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 ZNF507Q8TCN5 953 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 FAM167AQ96KS9 214 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 ATP6V0A4Q9HBG4 840 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 GPRC5CQ9NQ84 441 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 NRBP2Q9NSY0 501 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 MCM3APO60318 1980 aa20.98■□□□□ 0.95
CCDC78-206ENST00000463539 LRRC10BA6NIK2 292 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 GJC2Q5T442 439 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 LRRC55Q6ZSA7 311 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 KIFAP3Q92845 792 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 EMID1Q96A84 441 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 CNOT6LQ96LI5 555 aaKnown RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 APBA2Q99767 749 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 NIFKQ9BYG3 293 aaKnown RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 PCDHB13Q9Y5F0 798 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 K7ENM7 598 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 MAPTP10636 758 aaKnown RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 CYP2B6P20813 491 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 PTGS1P23219 599 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 HOXD13P35453 343 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 POLGP54098 1239 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 FKBP3Q00688 224 aaKnown RBP20.97■□□□□ 0.95
CCDC78-206ENST00000463539 NR1I3Q14994 352 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 PLPPR4Q7Z2D5 763 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 TMC6Q7Z403 805 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 FILIP1Q7Z7B0 1213 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 TRIM50Q86XT4 487 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 TAB2Q9NYJ8 693 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 NRBP1Q9UHY1 535 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 GJD2Q9UKL4 321 aa20.97■□□□□ 0.95
CCDC78-206ENST00000463539 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.96■□□□□ 0.95
CCDC78-206ENST00000463539 COPB1P53618 953 aaKnown RBP20.96■□□□□ 0.95
CCDC78-206ENST00000463539 FCGRTP55899 365 aa20.96■□□□□ 0.95
CCDC78-206ENST00000463539 EDRF1Q3B7T1 1238 aa20.96■□□□□ 0.95
CCDC78-206ENST00000463539 ZC2HC1CQ53FD0 456 aaPredicted RBP20.96■□□□□ 0.95
CCDC78-206ENST00000463539 VSTM4Q8IW00 320 aa20.96■□□□□ 0.95
CCDC78-206ENST00000463539 PPTC7Q8NI37 304 aa20.96■□□□□ 0.95
CCDC78-206ENST00000463539 FLRT1Q9NZU1 646 aa20.96■□□□□ 0.95
CCDC78-206ENST00000463539 PDXKO00764 312 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 N4BP3O15049 544 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 SMPD1P17405 629 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 SLC26A2P50443 739 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 IRF5Q13568 498 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 ALCAMQ13740 583 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 EMC2Q15006 297 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 CCDC144BQ3MJ40 725 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 DUSP28Q4G0W2 176 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 OLFML2BQ68BL8 750 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 IQSEC1Q6DN90 963 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 CCDC186Q7Z3E2 898 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 SLC17A8Q8NDX2 589 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 SLC7A3Q8WY07 619 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 BBXQ8WY36 941 aaPredicted RBP20.95■□□□□ 0.94
CCDC78-206ENST00000463539 SMARCAD1Q9H4L7 1026 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 XPNPEP1Q9NQW7 623 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 PDLIM7Q9NR12 457 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 TYW1Q9NV66 732 aaKnown RBP20.95■□□□□ 0.94
CCDC78-206ENST00000463539 IMPACTQ9P2X3 320 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 TRAF3IP3Q9Y228 551 aa20.95■□□□□ 0.94
CCDC78-206ENST00000463539 NKRFO15226 690 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 CALUO43852 315 aaPredicted RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 MARK3P27448 753 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 CTGFP29279 349 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 PEX3P56589 373 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 KCNA1Q09470 495 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 DMP1Q13316 513 aaPredicted RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 CCL14Q16627 93 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 ATP8B4Q8TF62 1192 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 CEP63Q96MT8 703 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 VPS16Q9H269 839 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 C17orf75Q9HAS0 396 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 RTN4Q9NQC3 1192 aaKnown RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 PPP1R37O75864 691 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 TPM2P07951 284 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 RFC5P40937 340 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 LACTBP83111 547 aaPredicted RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 AFG1LQ8WV93 481 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 STRA6Q9BX79 667 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 DHX33Q9H6R0 707 aaKnown RBP20.94■□□□□ 0.94
CCDC78-206ENST00000463539 PPME1Q9Y570 386 aa20.94■□□□□ 0.94
CCDC78-206ENST00000463539 ZMYM2Q9UBW7 1377 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 PRKCSHP14314 528 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-206ENST00000463539 CYP2C19P33261 490 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 PSMC4P43686 418 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 SMTNP53814 917 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 SOX10P56693 466 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 RTP1P59025 263 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 TARBP2Q15633 366 aaKnown RBP20.93■□□□□ 0.94
CCDC78-206ENST00000463539 TUBGCP2Q9BSJ2 902 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 ST6GALNAC4Q9H4F1 302 aa20.93■□□□□ 0.94
CCDC78-206ENST00000463539 TEX33O43247 280 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms